RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MAD2L1Q13257 205 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 RCAN2Q14206 197 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 GPR176Q14439 515 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 ZNF268Q14587 947 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 HSDL1Q3SXM5 330 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 SMUG1Q53HV7 270 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 PPP6R3Q5H9R7 873 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 NELFCDQ8IXH7 590 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 ZNF48Q96MX3 618 aaPredicted RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 ACCSQ96QU6 501 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 WRAP53Q9BUR4 548 aaKnown RBP2.96□□□□□ -1.94
SMC6-208ENST00000481708 SHARPINQ9H0F6 387 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 STARD5Q9NSY2 213 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 HACD3Q9P035 362 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 ERVK-18Q9QC07 812 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 RASD1Q9Y272 281 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 CCDC171Q6TFL3 1326 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 BPTFQ12830 3046 aa2.96□□□□□ -1.94
SMC6-208ENST00000481708 CENPVL1A0A0U1RR11 272 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 A0A1B0GUH1 482 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 CCDC162PA2VCL2 907 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ZNF732B4DXR9 585 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 LYPLA2O95372 231 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 EZRP15311 586 aaKnown RBP2.95□□□□□ -1.94
SMC6-208ENST00000481708 PPP2R1BP30154 601 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 FOXE3Q13461 319 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 HTR4Q13639 388 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 COTL1Q14019 142 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 PTPRRQ15256 657 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 SPHARQ15513 63 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 EXOC3L2Q2M3D2 409 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 GPR33Q49SQ1 333 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ZNF542PQ5EBM4 170 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 C1orf220Q5T0J3 134 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 OR4F3Q6IEY1 312 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 BLOC1S2Q6QNY1 142 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 CD164L2Q6UWJ8 174 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 CCDC36Q8IYA8 594 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 SLC39A11Q8N1S5 342 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 OR51G2Q8NGK0 314 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 MOAP1Q96BY2 351 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 COQ8BQ96D53 544 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 PPP1R16AQ96I34 528 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 CPB2Q96IY4 423 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 AKR1E2Q96JD6 320 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 PKMYT1Q99640 499 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 SPZ1Q9BXG8 430 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 POTEKPQ9BYX7 375 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ACTL8Q9H568 366 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 KAT8Q9H7Z6 458 aaKnown RBP2.95□□□□□ -1.94
SMC6-208ENST00000481708 UBTD1Q9HAC8 227 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ACOXLQ9NUZ1 547 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 FBXL2Q9UKC9 423 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ETV7Q9Y603 341 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 CFAP54Q96N23 3096 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 NBEAQ8NFP9 2946 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 FAM240BA0A1B0GVZ2 78 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 KRTAP23-1A1A580 65 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ZNF701M0R085 212 aaPredicted RBP2.95□□□□□ -1.94
SMC6-208ENST00000481708 RNASET2O00584 256 aaKnown RBP2.95□□□□□ -1.94
SMC6-208ENST00000481708 PAX4O43316 350 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 KDELR3O43731 214 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 KHDRBS3O75525 346 aaKnown RBP2.95□□□□□ -1.94
SMC6-208ENST00000481708 B3GAT3O94766 335 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ID1P41134 155 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ATP1B3P54709 279 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 SSTP61278 116 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ISL1P61371 349 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 HHEXQ03014 270 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 SULT2A1Q06520 285 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 GAGE2BQ13066 116 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ACCSLQ4AC99 568 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 GAGE2EQ4V326 116 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 GAGE2AQ6NT46 116 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 UGT3A1Q6NUS8 523 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 CYB5R4Q7L1T6 521 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 ITIH5Q86UX2 942 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 SH3YL1Q96HL8 342 aaPredicted RBP2.95□□□□□ -1.94
SMC6-208ENST00000481708 AGPAT1Q99943 283 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 DCLK3Q9C098 648 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 RGCCQ9H4X1 137 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 CNGB3Q9NQW8 809 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 PXMP2Q9NR77 195 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 GSN-AS1Q9NRJ2 163 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 MAN2C1Q9NTJ4 1040 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 POT1Q9NUX5 634 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 PKD2L2Q9NZM6 624 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 GAGE2DQ9UEU5 116 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 PIGLQ9Y2B2 252 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 OR10H1Q9Y4A9 318 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 CNTNAP2Q9UHC6 1331 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 KIAA0100Q14667 2235 aaKnown RBP2.95□□□□□ -1.94
SMC6-208ENST00000481708 DOCK4Q8N1I0 1966 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 RHODO00212 210 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 EEF2KO00418 725 aaKnown RBP2.95□□□□□ -1.94
SMC6-208ENST00000481708 SLC16A5O15375 505 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 MPPED1O15442 326 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 RS1O15537 224 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 HSPA12AO43301 675 aa2.95□□□□□ -1.94
SMC6-208ENST00000481708 N4BP1O75113 896 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms