RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ERAL1O75616 437 aaKnown RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 GPR75O95800 540 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 HPP00738 406 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 JUNP05412 331 aaKnown RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 UMODP07911 640 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 PRR35P0CG20 571 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 BCKDHAP12694 445 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 SDC1P18827 310 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 CSNK2A2P19784 350 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 DDCP20711 480 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 PRPS1L1P21108 318 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 MAOAP21397 527 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 F8A1P23610 371 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 EPHA3P29320 983 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 MPIP34949 423 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 ALDH3B2P48448 385 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 LGALS4P56470 323 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 CXADRP78310 365 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 RAE1P78406 368 aaKnown RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 BTG2P78543 158 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 RHAGQ02094 409 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 FOLH1Q04609 750 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 TLE3Q04726 772 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 EEF1A2Q05639 463 aaKnown RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 TRIM25Q14258 630 aaKnown RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 KIAA0040Q15053 153 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 PDK3Q15120 406 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 MAPRE2Q15555 327 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 EXT1Q16394 746 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 GFOD2Q3B7J2 385 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 SFT2D3Q587I9 215 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 FAM71E1Q6IPT2 247 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 CGB2Q6NT52 195 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 SLC48A1Q6P1K1 146 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 INO80CQ6PI98 192 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 TMEM205Q6UW68 189 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 EPGNQ6UW88 154 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 LARP4Q71RC2 724 aaKnown RBP eCLIP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 NDUFAF7Q7L592 441 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 ARPINQ7Z6K5 226 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 ANKRD37Q7Z713 158 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 MRGPREQ86SM8 312 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 DTX3Q8N9I9 347 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 LILRB4Q8NHJ6 448 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 ZFP28Q8NHY6 868 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 DNAJB14Q8TBM8 379 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 STON2Q8WXE9 905 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 PPCDCQ96CD2 204 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 MTERF3Q96E29 417 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 C11orf24Q96F05 449 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 NSL1Q96IY1 281 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 MAELQ96JY0 434 aaKnown RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 C3orf30Q96M34 536 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 TSSK3Q96PN8 268 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 BBS4Q96RK4 519 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 DOK1Q99704 481 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 DHRS9Q9BPW9 319 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 SYT3Q9BQG1 590 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 CADM1Q9BY67 442 aaKnown RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 ALOXE3Q9BYJ1 711 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 DPY30Q9C005 99 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 REEP4Q9H6H4 257 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 WDR55Q9H6Y2 383 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 ADAP2Q9NPF8 381 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 DLL4Q9NR61 685 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 PNO1Q9NRX1 252 aaKnown RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 TEX10Q9NXF1 929 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-209ENST00000479532 COPS7AQ9UBW8 275 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 NOX1Q9Y5S8 564 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 CLCA3PQ9Y6N3 262 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 SCN2AQ99250 2005 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 SPEGQ15772 3267 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 CACNA1AO00555 2505 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LOC102723996A0A087X1L8 192 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 IGHV1-45A0A0A0MS14 117 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LOC105371267A0A1B0GV96 52 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SAGE2PA6NJ88 616 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 GLOD5A6NK44 160 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SCAMP2O15127 329 aaKnown RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 BET1O15155 118 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 ACOX3O15254 700 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 NKX2-8O15522 239 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SCO2O43819 266 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 FGF17O60258 216 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 TBX19O60806 448 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 DNAJB6O75190 326 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SULT1C4O75897 302 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 BCAS2O75934 225 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 KRT36O76013 467 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SEC24DO94855 1032 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 LRATO95237 230 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 UBTFL6P0CB48 400 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-209ENST00000479532 SLC35E2P0CK97 266 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 G6PDP11413 515 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 CTRB1P17538 263 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 NT5EP21589 574 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 IL32P24001 234 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 GALNSP34059 522 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 STT3AP46977 705 aa5.74□□□□□ -1.49
SF3B1-209ENST00000479532 XKP51811 444 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms