RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 VDAC3Q9Y277 283 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 ABCA1O95477 2261 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 NBEAL1Q6ZS30 2694 aa14.35□□□□□ -0.11
DDX56-210ENST00000479440 A0A087WZY1 265 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 A0A096LNT2 108 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 IGLV3-32A0A0A0MS00 114 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 UBFD1O14562 309 aaKnown RBP14.34□□□□□ -0.11
DDX56-210ENST00000479440 CXCL13O43927 109 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 C2P06681 752 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 BSPH1Q075Z2 132 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 LOXL1Q08397 574 aaPredicted RBP14.34□□□□□ -0.11
DDX56-210ENST00000479440 C17orf67Q0P5P2 114 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 ZNHIT3Q15649 155 aaPredicted RBP14.34□□□□□ -0.11
DDX56-210ENST00000479440 TAB1Q15750 504 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 TECRLQ5HYJ1 363 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 PDSS1Q5T2R2 415 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 ESPNLQ6ZVH7 1005 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 ZNF619Q8N2I2 560 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 OR7G2Q8NG99 324 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 OR2V1Q8NHB1 315 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 DUSP19Q8WTR2 217 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 PHF21BQ96EK2 531 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 FARSBQ9NSD9 589 aaKnown RBP14.34□□□□□ -0.11
DDX56-210ENST00000479440 FLRT3Q9NZU0 649 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 MCM8Q9UJA3 840 aa14.34□□□□□ -0.11
DDX56-210ENST00000479440 A0A096LPK6 155 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 FAM234BA2RU67 622 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 SHISA8B8ZZ34 492 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 STX16-NPEPL1H3BU86 382 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 STX16O14662 325 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 TNFSF11O14788 317 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 GMFGO60234 142 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 GCM2O75603 506 aaPredicted RBP14.33□□□□□ -0.12
DDX56-210ENST00000479440 SLITRK5O94991 958 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 ANGPTL1O95841 491 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 PDYNP01213 254 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 IL3P08700 152 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 PABPC4LP0CB38 370 aaKnown RBP14.33□□□□□ -0.12
DDX56-210ENST00000479440 SLC25A16P16260 332 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 ZNF16P17020 682 aaPredicted RBP14.33□□□□□ -0.12
DDX56-210ENST00000479440 SRD5A1P18405 259 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 ME2P23368 584 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 MPIP34949 423 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 CDH11P55287 796 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 HEPACAMQ14CZ8 416 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 TMEM201Q5SNT2 666 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 SFRP5Q5T4F7 317 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 TFAP2EQ6VUC0 442 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 MARCH3Q86UD3 253 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 GABRG1Q8N1C3 465 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 BANPQ8N9N5 519 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 KISS1RQ969F8 398 aaPredicted RBP14.33□□□□□ -0.12
DDX56-210ENST00000479440 ZBTB8AQ96BR9 441 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 NSUN5Q96P11 429 aaKnown RBP14.33□□□□□ -0.12
DDX56-210ENST00000479440 RTN4RQ9BZR6 473 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 FBXO34Q9NWN3 711 aa14.33□□□□□ -0.12
DDX56-210ENST00000479440 CISD1Q9NZ45 108 aaKnown RBP14.33□□□□□ -0.12
DDX56-210ENST00000479440 PCDH7O60245 1069 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 IL33O95760 270 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 OTCP00480 354 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 RFX3P48380 749 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 SERPINB8P50452 374 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 RAC1P63000 192 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 TSC22D1Q15714 1073 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 MROH9Q5TGP6 573 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 AGAP6Q5VW22 663 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 HBMQ6B0K9 141 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 GTPBP8Q8N3Z3 284 aaPredicted RBP14.32□□□□□ -0.12
DDX56-210ENST00000479440 OR10H5Q8NGA6 315 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 PIWIL2Q8TC59 973 aaKnown RBP14.32□□□□□ -0.12
DDX56-210ENST00000479440 FBF1Q8TES7 1133 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 REXO5Q96IC2 774 aaKnown RBP14.32□□□□□ -0.12
DDX56-210ENST00000479440 SLC35C2Q9NQQ7 365 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 VPS29Q9UBQ0 182 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 ROS1P08922 2347 aa14.32□□□□□ -0.12
DDX56-210ENST00000479440 A0A087WV62 115 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 GNG14A0A1W2PPG7 69 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 C7orf72A4D263 438 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 ELOA3DA6NLF2 546 aaPredicted RBP14.31□□□□□ -0.12
DDX56-210ENST00000479440 ADAMDEC1O15204 470 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 SMIM24O75264 130 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 UTS2O95399 124 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 CD8AP01732 235 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 CTAGE8P0CG41 777 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 HSD3B1P14060 373 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 HSD3B2P26439 372 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 ZNF41P51814 821 aaPredicted RBP14.31□□□□□ -0.12
DDX56-210ENST00000479440 PRR5P85299 388 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 CSTF3Q12996 717 aaKnown RBP14.31□□□□□ -0.12
DDX56-210ENST00000479440 RNPS1Q15287 305 aaKnown RBP14.31□□□□□ -0.12
DDX56-210ENST00000479440 ZNF239Q16600 458 aaKnown RBP14.31□□□□□ -0.12
DDX56-210ENST00000479440 ELOA3BQ3SY89 546 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 CYB5R2Q6BCY4 276 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 MFSD12Q6NUT3 480 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 SSX8Q7RTT4 187 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 CCDC25Q86WR0 208 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 TDRPQ86YL5 185 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 CTAGE4Q8IX94 777 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 CEP112Q8N8E3 955 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms