RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 C1orf50Q9BV19 199 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 BHLHE41Q9C0J9 482 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-215ENST00000478473 DSN1Q9H410 356 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 ZNF395Q9H8N7 513 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-215ENST00000478473 EQTNQ9NQ60 294 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 CLCF1Q9UBD9 225 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 DKKL1Q9UK85 242 aa21.22■□□□□ 0.99
C9orf3-215ENST00000478473 EIF3LQ9Y262 564 aaKnown RBP21.22■□□□□ 0.99
C9orf3-215ENST00000478473 KIAA1549Q9HCM3 1950 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 ANKHD1Q8IWZ3 2542 aaKnown RBP21.21■□□□□ 0.99
C9orf3-215ENST00000478473 KCNK2O95069 426 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 TBXA2RP21731 343 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 CTSSP25774 331 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 PRIM2P49643 509 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 ASCL1P50553 236 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 SLC18A1P54219 525 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 PRKAG1P54619 331 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 WNT3P56703 355 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 TMEM44Q2T9K0 475 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 GRAMD1BQ3KR37 738 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 GOT1L1Q8NHS2 421 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-215ENST00000478473 DUSP19Q8WTR2 217 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 DOCK7Q96N67 2140 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 TM9SF2Q99805 663 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 PTGES2Q9H7Z7 377 aa21.21■□□□□ 0.99
C9orf3-215ENST00000478473 NOP53Q9NZM5 478 aaKnown RBP21.21■□□□□ 0.99
C9orf3-215ENST00000478473 FOXD3Q9UJU5 478 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-215ENST00000478473 POLQO75417 2590 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 WDR91A4D1P6 747 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 RCBTB2O95199 551 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 HMGN2P05204 90 aaKnown RBP21.2■□□□□ 0.98
C9orf3-215ENST00000478473 G6PDP11413 515 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 OPRM1P35372 400 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 SLC1A6P48664 564 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 RPL14P50914 215 aaKnown RBP21.2■□□□□ 0.98
C9orf3-215ENST00000478473 OCRLQ01968 901 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 LSM12Q3MHD2 195 aaKnown RBP21.2■□□□□ 0.98
C9orf3-215ENST00000478473 MARCH3Q86UD3 253 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 KRTCAP2Q8N6L1 136 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 C9orf106Q8NAJ2 232 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 OR4C3Q8NH37 302 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 SLC9A6Q92581 669 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 C1GALT1C1Q96EU7 318 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 C16orf58Q96GQ5 468 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 PIGUQ9H490 435 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 NEUROD4Q9HD90 331 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 ZCCHC3Q9NUD5 404 aaKnown RBP21.2■□□□□ 0.98
C9orf3-215ENST00000478473 MED11Q9P086 117 aa21.2■□□□□ 0.98
C9orf3-215ENST00000478473 ANGPTL1O95841 491 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 ALOX5P09917 674 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 PEPDP12955 493 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 BMP5P22003 454 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 STARP49675 285 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 KRTAP10-9P60411 292 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 CDC73Q6P1J9 531 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 ARSKQ6UWY0 536 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 OR56A1Q8NGH5 318 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 SFXN5Q8TD22 340 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 RNASE6Q93091 150 aaKnown RBP21.19■□□□□ 0.98
C9orf3-215ENST00000478473 MOAP1Q96BY2 351 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 BTBD2Q9BX70 525 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 TBL1XR1Q9BZK7 514 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 CXorf36Q9H7Y0 433 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 AKTIPQ9H8T0 292 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 GPATCH2Q9NW75 528 aa21.19■□□□□ 0.98
C9orf3-215ENST00000478473 A0A1W2PQD3 144 aa21.18■□□□□ 0.98
C9orf3-215ENST00000478473 CLCA1A8K7I4 914 aa21.18■□□□□ 0.98
C9orf3-215ENST00000478473 H0Y3Z8 333 aa21.18■□□□□ 0.98
C9orf3-215ENST00000478473 OXSR1O95747 527 aaPredicted RBP21.18■□□□□ 0.98
C9orf3-215ENST00000478473 EFNA1P20827 205 aaPredicted RBP21.18■□□□□ 0.98
C9orf3-215ENST00000478473 CCT3P49368 545 aaKnown RBP21.18■□□□□ 0.98
C9orf3-215ENST00000478473 EEF1A1P68104 462 aaKnown RBP21.18■□□□□ 0.98
C9orf3-215ENST00000478473 EEF1A1P5Q5VTE0 462 aa21.18■□□□□ 0.98
C9orf3-215ENST00000478473 DUSP26Q9BV47 211 aa21.18■□□□□ 0.98
C9orf3-215ENST00000478473 ACTRT3Q9BYD9 372 aa21.18■□□□□ 0.98
C9orf3-215ENST00000478473 UBQLN4Q9NRR5 601 aa21.18■□□□□ 0.98
C9orf3-215ENST00000478473 FAM221AA4D161 298 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 HK1P19367 917 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 BGNP21810 368 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 CLDN15P56746 228 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 STX3Q13277 289 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 ZAR1Q86SH2 424 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 MISPQ8IVT2 679 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 COX18Q8N8Q8 333 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 OR8J2Q8NGG1 315 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 NUDT8Q8WV74 236 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 LRRC46Q96FV0 321 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 SFXN3Q9BWM7 321 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 ACBD3Q9H3P7 528 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 CENPHQ9H3R5 247 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 KCNK9Q9NPC2 374 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 FBXO34Q9NWN3 711 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 RPH3AQ9Y2J0 694 aaPredicted RBP21.17■□□□□ 0.98
C9orf3-215ENST00000478473 PCNX3Q9H6A9 2034 aa21.17■□□□□ 0.98
C9orf3-215ENST00000478473 OR2M5A3KFT3 312 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 C7orf72A4D263 438 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 ANKRD28O15084 1053 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 C6orf47O95873 294 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 KRT16P08779 473 aa21.16■□□□□ 0.98
C9orf3-215ENST00000478473 TMIGD3P0DMS9 266 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms