RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PER3P56645 1201 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ACTA2P62736 377 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ACTG2P63267 376 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 SMN1Q16637 294 aaKnown RBP13.35□□□□□ -0.27
NPHP4-208ENST00000478423 PLAG1Q6DJT9 500 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 Q6ZPB1 254 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-208ENST00000478423 B3GNT7Q8NFL0 401 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 SFXN5Q8TD22 340 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 MYADMQ96S97 322 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 PCDHGB2Q9Y5G2 931 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ATG2BQ96BY7 2078 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 OR6C70A6NIJ9 312 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 H0Y8X5 98 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 BCAT2O15382 392 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-208ENST00000478423 AQP9O43315 295 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 HOXC8P31273 242 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 GIPRP48546 466 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 KCNJ10P78508 379 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 SCRN3Q0VDG4 424 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 FAM189A2Q15884 450 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 C9orf50Q5SZB4 431 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 TMED4Q7Z7H5 227 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 BPIFA2Q96DR5 249 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ZMYND19Q96E35 227 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-208ENST00000478423 PCDHGA10Q9Y5H3 936 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 SEC14L5O43304 696 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 PRKRAO75569 313 aaKnown RBP13.35□□□□□ -0.27
NPHP4-208ENST00000478423 KDM4BO94953 1096 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 B3GALT4O96024 378 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 VAMP1P23763 118 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 REEP5Q00765 189 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 TRAM1Q15629 374 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 GLT8D1Q68CQ7 371 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 CD300LGQ6UXG3 332 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 PAQR7Q86WK9 346 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 TMEM17Q86X19 198 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ABHD11Q8NFV4 315 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 RHBDD1Q8TEB9 315 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ZDHHC5Q9C0B5 715 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 SAP130Q9H0E3 1048 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 CD300AQ9UGN4 299 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF26P17031 533 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-208ENST00000478423 GPX2P18283 190 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ADPRHP54922 357 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 WNT4P56705 351 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ADAMTS19Q8TE59 1207 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 CHTF18Q8WVB6 975 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ELSPBP1Q96BH3 223 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 BMFQ96LC9 184 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 NPLQ9BXD5 320 aaPredicted RBP13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF304Q9HCX3 659 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 VDAC3Q9Y277 283 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 ATG4BQ9Y4P1 393 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 IER3IP1Q9Y5U9 82 aa13.35□□□□□ -0.27
NPHP4-208ENST00000478423 LOC100509620A0A075B734 347 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 CDC14CA4D256 554 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 H3BML4 177 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 H3BMQ9 156 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF208O43345 1280 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 SBK3P0C264 359 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 CRHBPP24387 322 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 PBX2P40425 430 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 DPP6P42658 865 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 GALK2Q01415 458 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 RASSF6Q6ZTQ3 369 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 HAVCR1Q96D42 359 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 COG8Q96MW5 612 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 TMEM185BQ9H7F4 350 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 EIF3KQ9UBQ5 218 aaKnown RBP13.34□□□□□ -0.27
NPHP4-208ENST00000478423 FAM183AA6NL82 134 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 WASHC1A8K0Z3 465 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 A8MVJ9 347 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF195O14628 629 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF613Q6PF04 617 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 WASH2PQ6VEQ5 465 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ZER1Q7Z7L7 766 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 PTRH1Q86Y79 214 aaKnown RBP13.34□□□□□ -0.27
NPHP4-208ENST00000478423 NLGN4XQ8N0W4 816 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 Q8N402 240 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 CCDC107Q8WV48 283 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 TM4SF18Q96CE8 201 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ABCD2Q9UBJ2 740 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ZNF639Q9UID6 485 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 TMA7Q9Y2S6 64 aaKnown RBP13.34□□□□□ -0.27
NPHP4-208ENST00000478423 LRRN3E7EW58 273 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 GATBO75879 557 aaKnown RBP13.34□□□□□ -0.27
NPHP4-208ENST00000478423 TFAP2AP05549 437 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ADH7P40394 386 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ALG10Q5BKT4 473 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ENTPD8Q5MY95 495 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 COX20Q5RI15 118 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 FBXO42Q6P3S6 717 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ABHD17CQ6PCB6 329 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 LRRN3Q9H3W5 708 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 GLIPR2Q9H4G4 154 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 ERVK13-1Q9NX77 482 aa13.34□□□□□ -0.27
NPHP4-208ENST00000478423 WBP1LQ9NX94 342 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms