RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 FADS6Q8N9I5 356 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 OR2M3Q8NG83 312 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 OR5D16Q8NGK9 328 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 DUSP19Q8WTR2 217 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 CKAP2Q8WWK9 683 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 ABTB1Q969K4 478 aaPredicted RBP14.17□□□□□ -0.14
HMGA1-206ENST00000478214 SDCCAG3Q96C92 435 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 UGT2B28Q9BY64 529 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 SERHL2Q9H4I8 314 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 SDHAF3Q9NRP4 125 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 GIN1Q9NXP7 522 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 TAS2R10Q9NYW0 307 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 MED11Q9P086 117 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 DKKL1Q9UK85 242 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 ALG1L2C9J202 215 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 PRSS44E7EML9 344 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 UBDO15205 165 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 ZIC3O60481 467 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 OXSR1O95747 527 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-206ENST00000478214 ANGPTL1O95841 491 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 PGRP06401 933 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 FREM3P0C091 2139 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 GLI4P10075 376 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 AGAP20933 346 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 TBXA2RP21731 343 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 UQCRC2P22695 453 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 DPP4P27487 766 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 GSTA3Q16772 222 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 PDCD4Q53EL6 469 aaKnown RBP14.16□□□□□ -0.14
HMGA1-206ENST00000478214 C1orf185Q5T7R7 199 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 RND1Q92730 232 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 SLC35G5Q96KT7 338 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 CCDC115Q96NT0 180 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 OR7D2Q96RA2 312 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 ZBTB18Q99592 522 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 TTYH2Q9BSA4 534 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 G6PC3Q9BUM1 346 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 RPH3AQ9Y2J0 694 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-206ENST00000478214 PCDHGB3Q9Y5G1 929 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 NCOA6Q14686 2063 aaPredicted RBP14.16□□□□□ -0.14
HMGA1-206ENST00000478214 MED12Q93074 2177 aa14.16□□□□□ -0.14
HMGA1-206ENST00000478214 UNC79Q9P2D8 2635 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 SLC22A3O75751 556 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 CLDN14O95500 239 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 NGFRP08138 427 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 HOXD4P09016 255 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-206ENST00000478214 GABRA1P14867 456 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 MATN1P21941 496 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 GRNP28799 593 aaKnown RBP14.15□□□□□ -0.14
HMGA1-206ENST00000478214 LCN1P31025 176 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 GCKP35557 465 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 IDH3AP50213 366 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 CASP9P55211 416 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 DSCR4P56555 118 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-206ENST00000478214 C17orf67Q0P5P2 114 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 DCST2Q5T1A1 773 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 ACAD11Q709F0 780 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 IFNEQ86WN2 208 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 CCDC71Q8IV32 467 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-206ENST00000478214 GATSQ8NAP1 163 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 GLB1L3Q8NCI6 653 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-206ENST00000478214 WDYHV1Q96HA8 205 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 MAGEB18Q96M61 343 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 OR52E6Q96RD3 313 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 EBF4Q9BQW3 602 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 INPP5KQ9BT40 448 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 PRDM14Q9GZV8 571 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 ACBD3Q9H3P7 528 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 TCF7L2Q9NQB0 619 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 SDR39U1Q9NRG7 319 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-206ENST00000478214 UBQLN4Q9NRR5 601 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 COQ3Q9NZJ6 369 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 ZIM2Q9NZV7 527 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 BTNL2Q9UIR0 455 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 CAMK2AQ9UQM7 478 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 RNF6Q9Y252 685 aa14.15□□□□□ -0.14
HMGA1-206ENST00000478214 MRPS18CQ9Y3D5 142 aaKnown RBP14.15□□□□□ -0.14
HMGA1-206ENST00000478214 KLF2Q9Y5W3 355 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-206ENST00000478214 NPIPA5A0A0B4J1W7 369 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 KDM4EB2RXH2 506 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-206ENST00000478214 NPIPA7E9PJI5 369 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 POLR3GO15318 223 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-206ENST00000478214 NDUFB5O43674 189 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 GMFGO60234 142 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 SOX30O94993 753 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 TGDSO95455 350 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 ACTL6AO96019 429 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 C1QCP02747 245 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 NPIPA8P0DM63 369 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 HK1P19367 917 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 ATP6V1C1P21283 382 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 HTR1EP28566 365 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 PTGER4P35408 488 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 ZFP36L2P47974 494 aaKnown RBP14.14□□□□□ -0.15
HMGA1-206ENST00000478214 STARP49675 285 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 AQP5P55064 265 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 GFRA1P56159 465 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 ACSF3Q4G176 576 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-206ENST00000478214 SAXO2Q658L1 398 aa14.14□□□□□ -0.15
HMGA1-206ENST00000478214 ZNF787Q6DD87 383 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms