RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 G6PC3Q9BUM1 346 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 TBL1XR1Q9BZK7 514 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 LDAHQ9H6V9 325 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 PPP4R1LQ9P1A2 415 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 KLHL14Q9P2G3 628 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 TINAGQ9UJW2 476 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 FBXL2Q9UKC9 423 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 TRGV5A0A0B4J1U4 118 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 NPIPA2E9PIF3 369 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 NPIPA3F8WFD2 350 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 ANGPTL1O95841 491 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 IGHG3P01860 377 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 TPOP07202 933 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 HPGDP15428 266 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 ENDOUP21128 410 aaKnown RBP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 CLK3P49761 638 aaKnown RBP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 GNGT1P63211 74 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 FUT5Q11128 374 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 UBAP2LQ14157 1087 aaKnown RBP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 SLC10A1Q14973 349 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 FLYWCH1Q4VC44 716 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 EIPR1Q53HC9 387 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 PAGE3Q5JUK9 113 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 WIPI1Q5MNZ9 446 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 ARHGAP11AQ6P4F7 1023 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 C3P1Q6ZMU1 363 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 BNC2Q6ZN30 1099 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 TRILQ7L0X0 811 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 C16orf62Q7Z3J2 963 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 HMGN2P46Q86SG4 172 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 YRDCQ86U90 279 aaKnown RBP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 PLCZ1Q86YW0 608 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 ZNF614Q8N883 585 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 OR4K17Q8NGC6 315 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 MIPOL1Q8TD10 442 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 ZFP90Q8TF47 636 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 C10orf82Q8WW14 230 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 XAGE5Q8WWM1 108 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 PAIP1Q9H074 479 aaKnown RBP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 UBQLN3Q9H347 655 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 RABEP2Q9H5N1 569 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 SLC52A3Q9NQ40 469 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 SLAMF8Q9P0V8 285 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 SPRR3Q9UBC9 169 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 ABCG2Q9UNQ0 655 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 PCDHGB3Q9Y5G1 929 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 FASNP49327 2511 aaKnown RBP9.36□□□□□ -0.91
HDAC6-222ENST00000478095 SHANK1Q9Y566 2161 aa9.36□□□□□ -0.91
HDAC6-222ENST00000478095 C15orf38-AP3S2A0A0A6YYH1 394 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 CENPVL1A0A0U1RR11 272 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 DUXAA6NLW8 204 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 HMGN4O00479 90 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 SCDO00767 359 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 LRRTM2O43300 516 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 FCMRO60667 390 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 AGFG2O95081 481 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 STSP08842 583 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 RNF224P0DH78 156 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 LSP1P33241 339 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 PTGS2P35354 604 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 DCTP40126 519 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 CRATP43155 626 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 MVDP53602 400 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 IRX1P78414 480 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-222ENST00000478095 GPR68Q15743 365 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 CD226Q15762 336 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 ATAD3BQ5T9A4 648 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 METTL21CQ5VZV1 264 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 CD163Q86VB7 1156 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 FJX1Q86VR8 437 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 MSRB3Q8IXL7 192 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 CHDHQ8NE62 594 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-222ENST00000478095 FAM83FQ8NEG4 500 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-222ENST00000478095 OR5M9Q8NGP3 310 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 OR14L1PQ8NHC6 308 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 DUSP19Q8WTR2 217 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 ROPN1LQ96C74 230 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 SH3YL1Q96HL8 342 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-222ENST00000478095 SDF2Q99470 211 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 ELAC2Q9BQ52 826 aaKnown RBP9.35□□□□□ -0.91
HDAC6-222ENST00000478095 DSN1Q9H410 356 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 TPT1P8Q9HAU6 139 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 UBQLN4Q9NRR5 601 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 EXD2Q9NVH0 621 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 QPCTLQ9NXS2 382 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 SLC25A37Q9NYZ2 338 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 MED11Q9P086 117 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 ERRFI1Q9UJM3 462 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-222ENST00000478095 DKKL1Q9UK85 242 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 MKLN1Q9UL63 735 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 ZNF835Q9Y2P0 537 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 SLC6A5Q9Y345 797 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 PCDHB14Q9Y5E9 798 aa9.35□□□□□ -0.91
HDAC6-222ENST00000478095 A0A096LPI6 279 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 A0A1B0GVC2 190 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 A0A1W2PP18 115 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 PRAMEF27A3QJZ7 478 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ALG1L2C9J202 215 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 NDUFB5O43674 189 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms