RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PIK3R3Q92569 461 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 RAB8BQ92930 207 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 ITFG2Q969R8 447 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 MRPL38Q96DV4 380 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM80Q96HE8 168 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 MAP6Q96JE9 813 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 ZFYVE19Q96K21 471 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PRRC1Q96M27 445 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 C12orf66Q96MD2 445 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 AMDHD1Q96NU7 426 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CAMK1GQ96NX5 476 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PRAP1Q96NZ9 151 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 BBS4Q96RK4 519 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 MGLLQ99685 303 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CHCHD6Q9BRQ6 235 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 YIPF4Q9BSR8 244 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 FUZQ9BT04 418 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 DPH7Q9BTV6 452 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 FNDC11Q9BVV2 318 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CDADC1Q9BWV3 514 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TAPBPLQ9BX59 468 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 C1QTNF7Q9BXJ2 289 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PINK1Q9BXM7 581 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 C6orf62Q9GZU0 229 aaPredicted RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 POLR2J3Q9H1A7 115 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 RSPH9Q9H1X1 276 aaPredicted RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OR51E2Q9H255 320 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 OR51I1Q9H343 314 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 GLIPR2Q9H4G4 154 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 WDR26Q9H7D7 661 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 MVB12BQ9H7P6 319 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TRIM45Q9H8W5 580 aaPredicted RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SFXN1Q9H9B4 322 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 LHX9Q9NQ69 397 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SLC35C2Q9NQQ7 365 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 GIMAP4Q9NUV9 329 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 LYARQ9NX58 379 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TEX10Q9NXF1 929 aaPredicted RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 GDE1Q9NZC3 331 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 RHCGQ9UBD6 479 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 CRNNQ9UBG3 495 aaPredicted RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TRPC4Q9UBN4 977 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SEC14L4Q9UDX3 406 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF229Q9UJW7 825 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PAIP2BQ9ULR5 123 aaKnown RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 A4GNTQ9UNA3 340 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 ENTPD4Q9Y227 616 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF281Q9Y2X9 895 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 PCYT1BQ9Y5K3 369 aaPredicted RBP4.63□□□□□ -1.67
SF3B6-202ENST00000478050 LRP4O75096 1905 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 TICRRQ7Z2Z1 1910 aa4.63□□□□□ -1.67
SF3B6-202ENST00000478050 SCN3AQ9NY46 2000 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 IGF2RP11717 2491 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ATG2BQ96BY7 2078 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 A0A1W2PRQ8 180 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SHISA3A0PJX4 238 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 LRIT2A6NDA9 550 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SNTNA6NMZ2 147 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 PDZK1P1A8MUH7 402 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 FAM227AF5H4B4 570 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 H3BN98 237 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 M0R129 80 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SYT5O00445 386 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 MAN2B1O00754 1011 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 AQP7O14520 342 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 HAT1O14929 419 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 MID1O15344 667 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ZSCAN9O15535 394 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 AQP9O43315 295 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 EMC8O43402 210 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ASNA1O43681 348 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 KIAA0513O60268 411 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 LCMT2O60294 686 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 BRINP1O60477 761 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ENTPD6O75354 484 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 NME6O75414 186 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 KAT7O95251 611 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 LGI1O95970 557 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 PTTG1O95997 202 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SCG5P05408 212 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SERPIND1P05546 499 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 FHP07954 510 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 HSMCR30P0CW71 290 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ACADMP11310 421 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TNFRSF1AP19438 455 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CSNK2A2P19784 350 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 POU3F2P20265 443 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CD72P21854 359 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 FCARP24071 287 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 PSMB5P28074 263 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CMPK1P30085 196 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 IFNA8P32881 189 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 GJA4P35212 333 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TRIM23P36406 574 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TGFBR1P36897 503 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 IFNGR2P38484 337 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 NCBP2P52298 156 aaKnown RBP eCLIP4.62□□□□□ -1.672e-8■■■■■ 30
SF3B6-202ENST00000478050 DEFA1P59665 94 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 DEFA3P59666 94 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ERVFRD-1P60508 538 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms