RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 POU2F1P14859 743 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 GNSP15586 552 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CD33P20138 364 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 KELP23276 732 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 FPR3P25089 353 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 SSTR4P31391 388 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 SDC2P34741 201 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 THBS2P35442 1172 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CHI3L1P36222 383 aaPredicted RBP6.41□□□□□ -1.38
UBR4-212ENST00000475973 NUDT1P36639 197 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 OMPP47874 163 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 RFX3P48380 749 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 SMSP52788 366 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 GNG2P59768 71 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CYP4F2P78329 520 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 ABATP80404 500 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 FABP5Q01469 135 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 PLAURQ03405 335 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 RUNX1T1Q06455 604 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 DMPKQ09013 629 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 TARDBPQ13148 414 aaKnown RBP eCLIP6.41□□□□□ -1.38
UBR4-212ENST00000475973 C1DQ13901 141 aaKnown RBP6.41□□□□□ -1.38
UBR4-212ENST00000475973 GINS1Q14691 196 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 GPR19Q15760 415 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CARTPTQ16568 116 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 PLA1AQ53H76 456 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 DDI2Q5TDH0 399 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 HACD4Q5VWC8 232 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 PRAMEF13Q5VWM6 474 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 HEPHL1Q6MZM0 1159 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CASP12Q6UXS9 341 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 ADAMTSL4Q6UY14 1074 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 TMEM91Q6ZNR0 172 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CREB3L2Q70SY1 520 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 PARS2Q7L3T8 475 aaKnown RBP6.41□□□□□ -1.38
UBR4-212ENST00000475973 PDZD3Q86UT5 571 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CMIPQ8IY22 773 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 SLC34A3Q8N130 599 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 KRT78Q8N1N4 520 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 GHDCQ8N2G8 530 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 TEX19Q8NA77 164 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 TMEM145Q8NBT3 493 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 NLGN4YQ8NFZ3 816 aaPredicted RBP6.41□□□□□ -1.38
UBR4-212ENST00000475973 OR4K5Q8NGD3 323 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 OR8D4Q8NGM9 314 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 SUN3Q8TAQ9 357 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 HAVCR2Q8TDQ0 301 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 GNPDA2Q8TDQ7 276 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 ACOT12Q8WYK0 555 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 AP3S1Q92572 193 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 TRIM63Q969Q1 353 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 RAD51AP1Q96B01 352 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 AP2M1Q96CW1 435 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 ZNF837Q96EG3 531 aaPredicted RBP6.41□□□□□ -1.38
UBR4-212ENST00000475973 AHCYL2Q96HN2 611 aaKnown RBP6.41□□□□□ -1.38
UBR4-212ENST00000475973 HSPA12BQ96MM6 686 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CNTNAP3BQ96NU0 1288 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 AMDHD1Q96NU7 426 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CAMK1GQ96NX5 476 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 QRFPRQ96P65 431 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 IL4I1Q96RQ9 567 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 ZNF607Q96SK3 696 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 TMEM246Q9BRR3 403 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CNTNAP3Q9BZ76 1288 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 ROGDIQ9GZN7 287 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 RNF32Q9H0A6 362 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 PCBD2Q9H0N5 130 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 ABCG4Q9H172 646 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 GLIPR2Q9H4G4 154 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 ANKRA2Q9H9E1 313 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 FOLH1BQ9HBA9 442 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 RXFP3Q9NSD7 469 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 SNTG1Q9NSN8 517 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 DNAJC27Q9NZQ0 273 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 IL36AQ9UHA7 158 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 CYP8B1Q9UNU6 501 aa6.41□□□□□ -1.38
UBR4-212ENST00000475973 DCHS1Q96JQ0 3298 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 IGHV1OR15-9A0A0B4J2B8 117 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 TMEM238LA0A1B0GVL6 79 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 A0A1W2PQF6 199 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 ANTXRLA6NF34 631 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 FAM25AB3EWG3 89 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 FAM25CB3EWG5 89 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 FAM25GB3EWG6 89 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 PATE3B3GLJ2 98 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 PRRT4C9JH25 899 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 SHOXO15266 292 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 PDPK1O15530 556 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 TLX2O43763 284 aaPredicted RBP6.4□□□□□ -1.38
UBR4-212ENST00000475973 OR10H3O60404 316 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 ZNF780AO75290 641 aaPredicted RBP6.4□□□□□ -1.38
UBR4-212ENST00000475973 UBXN7O94888 489 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 LYPD3O95274 346 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 THY1P04216 161 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 CD1AP06126 327 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 BCHEP06276 602 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 CHRM4P08173 479 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 SYPP08247 313 aa6.4□□□□□ -1.38
UBR4-212ENST00000475973 NR2F6P10588 404 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms