RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	SPDL1	Q96EA4	605 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	BTN2A3P	Q96KV6	586 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	SERPINB11	Q96P15	392 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	DCTN5	Q9BTE1	182 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	APOO	Q9BUR5	198 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	FNDC11	Q9BVV2	318 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ULBP3	Q9BZM4	244 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ING2	Q9H160	280 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZDHHC6	Q9H6R6	413 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	FBXO8	Q9NRD0	319 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	SDR39U1	Q9NRG7	319 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	CISH	Q9NSE2	258 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	KLF2	Q9Y5W3	355 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ACAN	P16112	2415 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	POLE	Q07864	2286 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	UNC13C	Q8NB66	2214 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912		A0A0D9SEW6	157 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	TMEM110-MUSTN1	A8MSY1	372 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912		E9PQ18	207 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	C19orf84	I3L1E1	186 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912		O00370	1275 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	KLF11	O14901	512 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	POLR1C	O15160	346 aa	Predicted RBP	3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	INPP4B	O15327	924 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	OR10H2	O60403	315 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	TM7SF2	O76062	418 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	CD160	O95971	181 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	TNF	P01375	233 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	IGLV3-25	P01717	112 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	APOE	P02649	317 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	PCCB	P05166	539 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	HTR1E	P28566	365 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	CASP14	P31944	242 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	GP5	P40197	560 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	NPY4R	P50391	375 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZNF75D	P51815	510 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	SLC8A3	P57103	927 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	NUCB2	P80303	420 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	HMGN5	P82970	282 aa	Known RBP	3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	ART3	Q13508	389 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	RAPSN	Q13702	412 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	CARD16	Q5EG05	197 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	RABGAP1L	Q5R372	815 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	KRT39	Q6A163	491 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	FAM198B	Q6UWH4	519 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	SLC47A2	Q86VL8	602 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	COMMD2	Q86X83	199 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	CCDC65	Q8IXS2	484 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	CEP57L1	Q8IYX8	460 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	TTC30B	Q8N4P2	665 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	OR56A4	Q8NGH8	313 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	KIAA1524	Q8TCG1	905 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	CT55	Q8WUE5	264 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	IRGQ	Q8WZA9	623 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	RAB7B	Q96AH8	199 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	EEF2KMT	Q96G04	330 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	RPRD1A	Q96P16	312 aa	Predicted RBP	3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	AGAP3	Q96P47	875 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	GBP5	Q96PP8	586 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	RAB3IP	Q96QF0	476 aa	Predicted RBP	3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	WRAP53	Q9BUR4	548 aa	Known RBP	3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	PANK2	Q9BZ23	570 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	TM6SF2	Q9BZW4	377 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	MIS12	Q9H081	205 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	WNT5B	Q9H1J7	359 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	ACTL8	Q9H568	366 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZWILCH	Q9H900	591 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	DMAC2	Q9NW81	257 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	CHCHD3	Q9NX63	227 aa	Known RBP	3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	VANGL2	Q9ULK5	521 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	GRIP1	Q9Y3R0	1128 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	LIPG	Q9Y5X9	500 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	TRPM6	Q9BX84	2022 aa		3.98	□□□□□ -1.77
PRKD3-208	ENST00000475912	CLDN11	O75508	207 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	KHDRBS3	O75525	346 aa	Known RBP	3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZMPSTE24	O75844	475 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	KIAA0754	O94854	1291 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	CALCA	P01258	141 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	UGT2B4	P06133	528 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	STS	P08842	583 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	OR2T7	P0C7T2	308 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	CCNB1	P14635	433 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	CA6	P23280	308 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	AK4	P27144	223 aa	Predicted RBP	3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	CASP1	P29466	404 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	GCLM	P48507	274 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	SERPINH1	P50454	418 aa	Known RBP	3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	DNA2	P51530	1060 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	NDST2	P52849	883 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	TPD52	P55327	224 aa	Predicted RBP	3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	SNRPF	P62306	86 aa	Known RBP	3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	KRT83	P78385	493 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	ARF5	P84085	180 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	RBPJ	Q06330	500 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	ACSM1	Q08AH1	577 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZNF273	Q14593	569 aa		3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	KNOP1	Q1ED39	458 aa	Known RBP	3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZNF630	Q2M218	657 aa	Predicted RBP	3.97	□□□□□ -1.77
PRKD3-208	ENST00000475912	CTU2	Q2VPK5	515 aa	Known RBP	3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms