RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 B3GNT7Q8NFL0 401 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 OR10G2Q8NGC3 310 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 OIT3Q8WWZ8 545 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 TFAP2CQ92754 450 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 ADIPOR1Q96A54 375 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 CNBD2Q96M20 576 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 PSD2Q9BQI7 771 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 WFDC6Q9BQY6 131 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 FNDC11Q9BVV2 318 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 WWTR1Q9GZV5 400 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 NXF5Q9H1B4 397 aaKnown RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 RHCGQ9UBD6 479 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 TMEFF2Q9UIK5 374 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 KCNE5Q9UJ90 142 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 MRTO4Q9UKD2 239 aaKnown RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 TMCC3Q9ULS5 477 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 A4GNTQ9UNA3 340 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 CHST2Q9Y4C5 530 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 FRYLO94915 3013 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 SDK2Q58EX2 2172 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 TEX51A0A1B0GUA7 166 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ARRDC5A6NEK1 342 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 PROB1E7EW31 1015 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 H0YAE9 185 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 AP3D1O14617 1153 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 FRS3O43559 492 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 SEMA7AO75326 666 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 CCNB2O95067 398 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 IL33O95760 270 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 CD63P08962 238 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 CCNYL3P0C7X3 344 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 CDH2P19022 906 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 IFNA8P32881 189 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 DAPP51397 102 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ATP12AP54707 1039 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 TAS2R41P59536 307 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 PSPHP78330 225 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 PDK3Q15120 406 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF141Q15928 474 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ZSWIM7Q19AV6 140 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 MICAQ29983 383 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 SLC36A3Q495N2 470 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 PDZK1Q5T2W1 519 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ANKRD34AQ69YU3 496 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 KDM4DQ6B0I6 523 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 FAHD1Q6P587 224 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 FAM199XQ6PEV8 388 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 C6orf15Q6UXA7 325 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 RANBP3LQ86VV4 465 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 OFCC1Q8IZS5 231 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF614Q8N883 585 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ZSCAN1Q8NBB4 408 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 C17orf47Q8NEP4 570 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 NFAM1Q8NET5 270 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 OR52J3Q8NH60 311 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 WDR36Q8NI36 951 aaKnown RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 VMP1Q96GC9 406 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ALPK1Q96QP1 1244 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 LPAR4Q99677 370 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ANKRD60Q9BZ19 345 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 SEMA4CQ9C0C4 833 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 TOR3AQ9H497 397 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 AKIRIN1Q9H9L7 192 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 NMNAT1Q9HAN9 279 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 RLIMQ9NVW2 624 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 PPIEQ9UNP9 301 aaKnown RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 PTRH2Q9Y3E5 179 aaKnown RBP12.69□□□□□ -0.38
TRAF4-210ENST00000475329 PCDHGA3Q9Y5H0 932 aa12.69□□□□□ -0.38
TRAF4-210ENST00000475329 PMS2P1A4D2B8 440 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 CDHR4A6H8M9 788 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 NPIPB9F8W1W9 429 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 FAAHO00519 579 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 PCDH17O14917 1159 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 TO15178 435 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 SEC24DO94855 1032 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-210ENST00000475329 OXSR1O95747 527 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-210ENST00000475329 DLGAP3O95886 979 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 ANXA8P13928 327 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 ELAVL4P26378 380 aaKnown RBP12.68□□□□□ -0.38
TRAF4-210ENST00000475329 LCN1P31025 176 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 KRT20P35900 424 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 FOLR3P41439 243 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 GPR143P51810 404 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 ADARB1P78563 741 aaKnown RBP12.68□□□□□ -0.38
TRAF4-210ENST00000475329 ZIK1Q3SY52 487 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-210ENST00000475329 DCST1Q5T197 706 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 TMEM164Q5U3C3 297 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 PLEKHM3Q6ZWE6 761 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 SLCO6A1Q86UG4 719 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 CMIPQ8IY22 773 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF527Q8NB42 609 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF555Q8NEP9 628 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 OR2Y1Q8NGV0 311 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 HSPBAP1Q96EW2 488 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 MBOAT4Q96T53 435 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 MCHR1Q99705 422 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 WDR77Q9BQA1 342 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-210ENST00000475329 POLR2J2Q9GZM3 115 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms