RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 TSPAN14Q8NG11 270 aa18.33■□□□□ 0.52
SSR1-204ENST00000474597 SLC7A13Q8TCU3 470 aa18.33■□□□□ 0.52
SSR1-204ENST00000474597 SLC38A4Q969I6 547 aa18.33■□□□□ 0.52
SSR1-204ENST00000474597 EVA1AQ9H8M9 152 aa18.33■□□□□ 0.52
SSR1-204ENST00000474597 PCDHGA10Q9Y5H3 936 aa18.33■□□□□ 0.52
SSR1-204ENST00000474597 SH3PXD2BA1X283 911 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 CDHR4A6H8M9 788 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 IDSB3KWA1 339 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 MEN1O00255 615 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 CYP7B1O75881 506 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 CLPTM1O96005 669 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 ADAP00813 363 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 IGKV3-11P04433 115 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 SMIM18P0DKX4 95 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 CD59P13987 128 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 ATP6V1B1P15313 513 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 RYKP34925 604 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 RPP38P78345 283 aaKnown RBP18.32■□□□□ 0.52
SSR1-204ENST00000474597 RAPSNQ13702 412 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 SEC23BQ15437 767 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 DECR1Q16698 335 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 ZNF385CQ66K41 422 aaPredicted RBP18.32■□□□□ 0.52
SSR1-204ENST00000474597 MORN4Q8NDC4 146 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 GAL3ST4Q96RP7 486 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 CMKLR1Q99788 373 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 PRR14Q9BWN1 585 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 FBXO8Q9NRD0 319 aa18.32■□□□□ 0.52
SSR1-204ENST00000474597 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.32■□□□□ 0.52
SSR1-204ENST00000474597 MRTO4Q9UKD2 239 aaKnown RBP18.32■□□□□ 0.52
SSR1-204ENST00000474597 C2orf92A0A1B0GVN3 265 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 DPPA5A6NC42 116 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 ONECUT2O95948 504 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 KLK3P07288 261 aaPredicted RBP18.31■□□□□ 0.52
SSR1-204ENST00000474597 CCL4P13236 92 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 ELK4P28324 431 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 RNF144AP50876 292 aaPredicted RBP18.31■□□□□ 0.52
SSR1-204ENST00000474597 DCAF7P61962 342 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 ZNF770Q6IQ21 691 aaPredicted RBP18.31■□□□□ 0.52
SSR1-204ENST00000474597 RRM2BQ7LG56 351 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 SLC29A4Q7RTT9 530 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 TSPYL5Q86VY4 417 aaPredicted RBP18.31■□□□□ 0.52
SSR1-204ENST00000474597 ADAMTS16Q8TE57 1224 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 LCORQ96JN0 433 aaPredicted RBP18.31■□□□□ 0.52
SSR1-204ENST00000474597 NUDT9Q9BW91 350 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 TMEM9BQ9NQ34 198 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 MAN2C1Q9NTJ4 1040 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 SLC39A1Q9NY26 324 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 NDRG4Q9ULP0 352 aaKnown RBP18.31■□□□□ 0.52
SSR1-204ENST00000474597 HSPE1-MOB4S4R3N1 261 aa18.31■□□□□ 0.52
SSR1-204ENST00000474597 FRG2CA6NGY1 282 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ALOX12BO75342 701 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 SMNDC1O75940 238 aaKnown RBP eCLIP18.3■□□□□ 0.52
SSR1-204ENST00000474597 CCKBRP32239 447 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ATP12AP54707 1039 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 EMP2P54851 167 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 TARDBPQ13148 414 aaKnown RBP eCLIP18.3■□□□□ 0.522e-15■■□□□ 11.6
SSR1-204ENST00000474597 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.3■□□□□ 0.52
SSR1-204ENST00000474597 PARP8Q8N3A8 854 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 OR1N1Q8NGS0 311 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 DIO2Q92813 273 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 SLC41A3Q96GZ6 507 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 FUZQ9BT04 418 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 UCK2Q9BZX2 261 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ADNPQ9H2P0 1102 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ANKRD19PQ9H560 264 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 C11orf16Q9NQ32 467 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 SEMA4GQ9NTN9 838 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 GPN3Q9UHW5 284 aaPredicted RBP18.3■□□□□ 0.52
SSR1-204ENST00000474597 MYO15AQ9UKN7 3530 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 A0A0C4DFX4 3053 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 GDF9O60383 454 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 OR5F1O95221 314 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 GKN3PP0CG01 181 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 DRD5P21918 477 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 EPHA2P29317 976 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 IFNGR2P38484 337 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 FOXL2P58012 376 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ISL1P61371 349 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 CD47Q08722 323 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ZNF141Q15928 474 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 MEP1AQ16819 746 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ZSWIM7Q19AV6 140 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 RBM48Q5RL73 367 aaKnown RBP18.3■□□□□ 0.52
SSR1-204ENST00000474597 PGBD2Q6P3X8 592 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ZNF730Q6ZMV8 503 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 ANKRD37Q7Z713 158 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 OR4K5Q8NGD3 323 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 HRASLS5Q96KN8 279 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 PITX2Q99697 317 aa18.3■□□□□ 0.52
SSR1-204ENST00000474597 POLR2J2Q9GZM3 115 aaKnown RBP18.3■□□□□ 0.52
SSR1-204ENST00000474597 POLR2J3Q9H1A7 115 aaKnown RBP18.3■□□□□ 0.52
SSR1-204ENST00000474597 NXF5Q9H1B4 397 aaKnown RBP18.3■□□□□ 0.52
SSR1-204ENST00000474597 A6NHS1 94 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 OR6C76A6NM76 312 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 PRR33A8MZF0 331 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 ZNF136P52737 540 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 SPEM2Q0P670 501 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 KLHL17Q6TDP4 642 aa18.29■□□□□ 0.52
SSR1-204ENST00000474597 HDAC2Q92769 488 aaKnown RBP18.29■□□□□ 0.52
SSR1-204ENST00000474597 EFHD2Q96C19 240 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms