RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TUBA1AQ71U36 451 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 SLCO6A1Q86UG4 719 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 ATCAYQ86WG3 371 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 DEFB119Q8N690 84 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 IQCF1Q8N6M8 205 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 NANOGP1Q8N7R0 232 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 PROKR2Q8NFJ6 384 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 OR6Q1Q8NGQ2 317 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 WDR36Q8NI36 951 aaKnown RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 FNDC8Q8TC99 324 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 SH3YL1Q96HL8 342 aaPredicted RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 FAM46AQ96IP4 442 aaKnown RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 ZNF578Q96N58 590 aaPredicted RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 ZNF582Q96NG8 517 aaPredicted RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 OPALINQ96PE5 141 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 OR5M11Q96RB7 305 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 MGLLQ99685 303 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 PELOQ9BRX2 385 aaKnown RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 ALOXE3Q9BYJ1 711 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 PRRG3Q9BZD7 231 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 NXF2Q9GZY0 626 aaKnown RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 DSN1Q9H410 356 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 EGLN3Q9H6Z9 239 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 PRTFDC1Q9NRG1 225 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 MED17Q9NVC6 651 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 C14orf105Q9NVL8 296 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 TAS2R16Q9NYV7 291 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 TVP23BQ9NYZ1 205 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.11□□□□□ -0.95
USP39-214ENST00000474572 DIMT1Q9UNQ2 313 aaKnown RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 DOLKQ9UPQ8 538 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 NTNG1Q9Y2I2 539 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 RANBP2P49792 3224 aaKnown RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 IGHV5-51A0A0C4DH38 117 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 IRGMA1A4Y4 181 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 METTL15A6NJ78 407 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 K7ESF4 209 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 M0R3G1 203 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 CCRL2O00421 344 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 PEX12O00623 359 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 PRODHO43272 600 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 AIREO43918 545 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 PIP5K1CO60331 668 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 CSO75390 466 aaKnown RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 SCG5P05408 212 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 GIMD1P0DJR0 217 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 PRG2P13727 222 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 BCKDHBP21953 392 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 CALRP27797 417 aaKnown RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 GABRA3P34903 492 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 IDUAP35475 653 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 OPRL1P41146 370 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 MLLT3P42568 568 aaPredicted RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 GPR3P46089 330 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 SERPINB10P48595 397 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 GFERP55789 205 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 HSD17B7P56937 341 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 C21orf59P57076 290 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 RAB15P59190 212 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 RPL6Q02878 288 aaKnown RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 PRKCDQ05655 676 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.1□□□□□ -0.95
USP39-214ENST00000474572 FUT7Q11130 342 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 ZNF155Q12901 538 aaPredicted RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 FOXD4Q12950 439 aaPredicted RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 ZNF846Q147U1 533 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 CCDC85BQ15834 202 aaPredicted RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 ZNF141Q15928 474 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 SSX1Q16384 188 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 MINDY4Q4G0A6 757 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 C3orf38Q5JPI3 329 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 AADACL4Q5VUY2 407 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 ZNF613Q6PF04 617 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 USP43Q70EL4 1123 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 ZAR1Q86SH2 424 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 SLC15A4Q8N697 577 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 OR52I1Q8NGK6 324 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 OR4Q3Q8NH05 313 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 BRIX1Q8TDN6 353 aaKnown RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 GPR151Q8TDV0 419 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 DOK4Q8TEW6 326 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 TMEM255BQ8WV15 326 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 OIT3Q8WWZ8 545 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 S100ZQ8WXG8 99 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 OSTF1Q92882 214 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 PEX11GQ96HA9 241 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 PLEKHA8Q96JA3 519 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 HSPA12BQ96MM6 686 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 ZNF426Q9BUY5 554 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 WDR12Q9GZL7 423 aaKnown RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 DUSP15Q9H1R2 295 aaPredicted RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 ARMC7Q9H6L4 198 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 ERVMER34-1Q9H9K5 563 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 PDE7BQ9NP56 450 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 ISYNA1Q9NPH2 558 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 KRCC1Q9NPI7 259 aaPredicted RBP9.1□□□□□ -0.95
USP39-214ENST00000474572 TBC1D23Q9NUY8 699 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 NLGN3Q9NZ94 848 aa9.1□□□□□ -0.95
USP39-214ENST00000474572 CNIH4Q9P003 139 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms