RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 RPS7P62081 194 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 AIMP2Q13155 320 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 MED21Q13503 144 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 RNF151Q2KHN1 245 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 C6orf136Q5SQH8 315 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 SLC8B1Q6J4K2 584 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 FAM198BQ6UWH4 519 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 CARM1Q86X55 608 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 WFDC3Q8IUB2 231 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 TEX26Q8N6G2 289 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 OR5T3Q8NGG3 340 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 OR2I1PQ8NGU4 316 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 WDR36Q8NI36 951 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 SNIP1Q8TAD8 396 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 ZFAND1Q8TCF1 268 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 SLC2A12Q8TD20 617 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 RBPMSQ93062 196 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 WBP2Q969T9 261 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 MS4A3Q96HJ5 214 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 LINC00052Q96N35 136 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 DOK1Q99704 481 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 XYLT2Q9H1B5 865 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 NELFAQ9H3P2 528 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 LMAN1LQ9HAT1 526 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 PLEKHA1Q9HB21 404 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 HHATLQ9HCP6 504 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 NECAP2Q9NVZ3 263 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 ACSL6Q9UKU0 697 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 HS3ST3A1Q9Y663 406 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 SLCO1B1Q9Y6L6 691 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 MST1RQ04912 1400 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 MYH9P35579 1960 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 CNTNAP1P78357 1384 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 ASTN1O14525 1302 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 FAM240BA0A1B0GVZ2 78 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 HMX2A2RU54 273 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 C2orf78A6NCI8 922 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 TUBAL3A6NHL2 446 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 WNT9AO14904 365 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 CDC14BO60729 498 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 C6orf47O95873 294 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 ADAP00813 363 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 C1QCP02747 245 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 ARG1P05089 322 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 LPLP06858 475 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 C8BP07358 591 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 METTL15P1P0C7V9 234 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 EBLN1P0CF75 366 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 EN2P19622 333 aaPredicted RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 GCAP28676 217 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 PTGFRP43088 359 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 MAGEA3P43357 314 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 GABRA4P48169 554 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 PSMD8P48556 350 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 CSNK1A1P48729 337 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 DNA2P51530 1060 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 TDGF1P3P51864 188 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 CNN1P51911 297 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 HSPA2P54652 639 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 TAS2R39P59534 338 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 PKIAP61925 76 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 CTBSQ01459 385 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 RBBP4Q09028 425 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 SMN1Q16637 294 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 CYP1B1Q16678 543 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 HAGHQ16775 308 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 ATP6V1FQ16864 119 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 XKR7Q5GH72 579 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 SIRPB2Q5JXA9 342 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 FNBP1LQ5T0N5 605 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 SAXO2Q658L1 398 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 Q6ZPB1 254 aaPredicted RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 DYMQ7RTS9 669 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 PDSS2Q86YH6 399 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 LRRC56Q8IYG6 542 aaPredicted RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 CPNE9Q8IYJ1 553 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 PXT1Q8NFP0 134 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 FAM110DQ8TAY7 271 aaPredicted RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 STK35Q8TDR2 534 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 SAP25Q8TEE9 199 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 U2AF1L4Q8WU68 220 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 ACDQ96AP0 544 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 CCDC124Q96CT7 223 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 SMIM12Q96EX1 92 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 ELMOD3Q96FG2 381 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 RAB40CQ96S21 281 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 CMSS1Q9BQ75 279 aaKnown RBP3.25□□□□□ -1.89
UBR3-208ENST00000474426 JAM3Q9BX67 310 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 NUAK2Q9H093 628 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 Q9N2K0 584 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 PRSS16Q9NQE7 514 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 UBQLN2Q9UHD9 624 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 LHX6Q9UPM6 363 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 COLEC10Q9Y6Z7 277 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 MYH2Q9UKX2 1941 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 CEMIPQ8WUJ3 1361 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 ARHGAP23Q9P227 1491 aa3.25□□□□□ -1.89
UBR3-208ENST00000474426 PPIAL4EA0A075B759 164 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 A0A087X1B8 175 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms