RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 WDR25Q64LD2 544 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 PMF1Q6P1K2 205 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 BTNL3Q6UXE8 466 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 GRAMD2AQ8IUY3 354 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 LRRC49Q8IUZ0 686 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF683Q8IZ20 524 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 ZSCAN4Q8NAM6 433 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 OR4F17Q8NGA8 305 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 GTF3AQ92664 365 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 ART4Q93070 314 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 OR4F4Q96R69 305 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 ZBTB18Q99592 522 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 CHCHD5Q9BSY4 110 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 TCHPQ9BT92 498 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 ST6GALNAC5Q9BVH7 336 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 SLC25A51Q9H1U9 297 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 IL1RL2Q9HB29 575 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 SMPD3Q9NY59 655 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 MRPL39Q9NYK5 338 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 NUDT4Q9NZJ9 180 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 AIPL1Q9NZN9 384 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 TMEM181Q9P2C4 612 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 CYTH4Q9UIA0 394 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 LCMT1Q9UIC8 334 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF346Q9UL40 294 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 RPH3ALQ9UNE2 315 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 MRPL11Q9Y3B7 192 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 TCOF1Q13428 1488 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 FHOD3Q2V2M9 1422 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 PCF11O94913 1555 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 REREQ9P2R6 1566 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 A0A087X002 238 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 A8MXK9 166 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 IMPA2O14732 288 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 DUX1O43812 170 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 TYROBPO43914 113 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 SNAP91O60641 907 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 RAMP1O60894 148 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 N4BP1O75113 896 aaKnown RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 TRIM3O75382 744 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 SNX4O95219 450 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 DUS4LO95620 317 aaKnown RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 IGFBP1P08833 259 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 CCDC159P0C7I6 412 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF10P21506 573 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 CALB2P22676 271 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 LMO2P25791 158 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 CA8P35219 290 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 CEBPDP49716 269 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 NDUFV3P56181 108 aaKnown RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 ACY1Q03154 408 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 HYAL1Q12794 435 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 ATXN7L3Q14CW9 347 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 UBE2V2Q15819 145 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 MAPK6Q16659 721 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 EXOC3L2Q2M3D2 409 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 LINC01620Q4KN68 170 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 C2CD6Q53TS8 623 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 ACER2Q5QJU3 275 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 RABGAP1LQ5R372 815 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 TTC23Q5W5X9 447 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 ARMCX5Q6P1M9 558 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 GCNT7Q6ZNI0 430 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 WDSUB1Q8N9V3 476 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 C11orf45Q8TAV5 145 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 IL1F10Q8WWZ1 152 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 DNASE2BQ8WZ79 361 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 TAF15Q92804 592 aaKnown RBP eCLIP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 ADIPOR1Q96A54 375 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 WBP1Q96G27 269 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 DHTKD1Q96HY7 919 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 LINC00479Q96M42 142 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 PRICKLE1Q96MT3 831 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 CASD1Q96PB1 797 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 TESK2Q96S53 571 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 SH3GL3Q99963 347 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 PUS3Q9BZE2 481 aaKnown RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 CRNKL1Q9BZJ0 848 aaKnown RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 VCX2Q9H322 139 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 TUBB1Q9H4B7 451 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 ZSCAN16Q9H4T2 348 aaPredicted RBP3.5□□□□□ -1.85
BRCA1-212ENST00000473961 JPT2Q9H910 190 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 AMBNQ9NP70 447 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 SPATA2Q9UM82 520 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 SLCO1B1Q9Y6L6 691 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 PTCH1Q13635 1447 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 KDRP35968 1356 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 ROCK1Q13464 1354 aa3.5□□□□□ -1.85
BRCA1-212ENST00000473961 EFCAB5A4FU69 1503 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ABCC2Q92887 1545 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ARHGEF12Q9NZN5 1544 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 GRIN2AQ12879 1464 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 PLB1Q6P1J6 1458 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 TRABD2BA6NFA1 517 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 CCDC169A6NNP5 214 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 FOXI3A8MTJ6 420 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 POLR3GO15318 223 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 TM9SF1O15321 606 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ZSCAN12O43309 604 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 PPIHO43447 177 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms