RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ATP12AP54707 1039 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 ALDH6A1Q02252 535 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 PLGLB1Q02325 96 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 GNA13Q14344 377 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 GPAT3Q53EU6 434 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 BNC2Q6ZN30 1099 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 LRRC74BQ6ZQY2 392 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 SLC22A16Q86VW1 577 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 METTL25Q8N6Q8 603 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 ZNF527Q8NB42 609 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 OR8J3Q8NGG0 315 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 OR4C3Q8NH37 302 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 SH3GL1Q99961 368 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 TBL1XR1Q9BZK7 514 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 IKZF5Q9H5V7 419 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 EFCAB1Q9HAE3 211 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 GALNT9Q9HCQ5 603 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 A4GALTQ9NPC4 353 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 SDHAF3Q9NRP4 125 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 ASF1BQ9NVP2 202 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 WDR45Q9Y484 360 aa17.36■□□□□ 0.37
CTDSP1-207ENST00000473420 LRRC3CA6NJW4 275 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 SCDO00767 359 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 ADAM10O14672 748 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 SNPHO15079 494 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 KIAA0513O60268 411 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 TFPTP0C1Z6 253 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 NR2F1P10589 423 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 HPGDP15428 266 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 MASP1P48740 699 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 MLLT10P55197 1068 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 CAPRIN1Q14444 709 aaKnown RBP17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 SYPL1Q16563 259 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 PRR30Q53SZ7 412 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 FNDC7Q5VTL7 733 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 PRAMEF8Q5VWM4 474 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 PRAMEF7Q5VXH5 474 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 TYW3Q6IPR3 259 aaKnown RBP17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 NANOGP8Q6NSW7 305 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 HACD2Q6Y1H2 254 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 FRRS1Q6ZNA5 592 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 MISPQ8IVT2 679 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 NR4A3Q92570 626 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 DTNBP1Q96EV8 351 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 THUMPD3Q9BV44 507 aaKnown RBP17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 TMEM38AQ9H6F2 299 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 NANOGQ9H9S0 305 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 OLAHQ9NV23 265 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 QPCTLQ9NXS2 382 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 B4GALT7Q9UBV7 327 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 NCKAP5O14513 1909 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 SHANK1Q9Y566 2161 aa17.35■□□□□ 0.37
CTDSP1-207ENST00000473420 C15orf38-AP3S2A0A0A6YYH1 394 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 SCO2O43819 266 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 FCMRO60667 390 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 ZIC2O95409 532 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 H6PDO95479 791 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 ANGPTL1O95841 491 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 CRISP3P54108 245 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 MTPNP58546 118 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 MAPK11Q15759 364 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 ZNF141Q15928 474 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 KLHL26Q53HC5 615 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 RNFT1Q5M7Z0 435 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 GCNT6Q5T4J0 391 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 TIGD3Q6B0B8 471 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 APOOLQ6UXV4 268 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 PRICKLE2Q7Z3G6 844 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 ARPINQ7Z6K5 226 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 SIAH3Q8IW03 269 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 ZNF619Q8N2I2 560 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 FITM2Q8N6M3 262 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 ANKFN1Q8N957 763 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 OR1J4Q8NGS1 313 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 JSRP1Q96MG2 331 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 SMG1Q96Q15 3661 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 SLX1AQ9BQ83 275 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 SPATA9Q9BWV2 254 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 SLC38A1Q9H2H9 487 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 ZNF703Q9H7S9 590 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 KAT8Q9H7Z6 458 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 SUCOQ9UBS9 1254 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 TAGLN3Q9UI15 199 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 MKLN1Q9UL63 735 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 C15orf41Q9Y2V0 281 aa17.34■□□□□ 0.37
CTDSP1-207ENST00000473420 DSPPQ9NZW4 1301 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 AIM2O14862 343 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 TFECO14948 347 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 SLC28A2O43868 658 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 BCHEP06276 602 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 CHRM4P08173 479 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 NUDT7P0C024 238 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 ARAFP10398 606 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 ENDOUP21128 410 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 RFC3P40938 356 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 TDGF1P3P51864 188 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 PPIAP62937 165 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 TLE1Q04724 770 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 C17orf67Q0P5P2 114 aa17.33■□□□□ 0.36
CTDSP1-207ENST00000473420 SELPLGQ14242 412 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms