RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	ERAS	Q7Z444	233 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	ANKRD37	Q7Z713	158 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	IFNE	Q86WN2	208 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	FADS6	Q8N9I5	356 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	C18orf25	Q96B23	403 aa	Predicted RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	CASD1	Q96PB1	797 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	NFKBIZ	Q9BYH8	718 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	DPH5	Q9H2P9	285 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	PRR34	Q9NV39	138 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	RBM28	Q9NW13	759 aa	Known RBP	2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	RDH8	Q9NYR8	311 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	L3MBTL1	Q9Y468	752 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	KIF3A	Q9Y496	699 aa		2.85	□□□□□ -1.95
PTCD3-209	ENST00000472044	CLDN5	O00501	218 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	DUX1	O43812	170 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	SMPD2	O60906	423 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	STX11	O75558	287 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	MFN2	O95140	757 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	ANP32D	O95626	131 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	KRT8	P05787	483 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	HEXB	P07686	556 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC35E2	P0CK97	266 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	CALCB	P10092	127 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	TRPC1	P48995	793 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	ACADVL	P49748	655 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	CD47	Q08722	323 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	PEX6	Q13608	980 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	KCNJ11	Q14654	390 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	QRICH1	Q2TAL8	776 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	GLYR1	Q49A26	553 aa	Predicted RBP	2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	FAM120AOS	Q5T036	256 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	RIPPLY2	Q5TAB7	128 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	METTL11B	Q5VVY1	283 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	UFSP1	Q6NVU6	142 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	CYS1	Q717R9	158 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	LRRC70	Q7Z2Q7	622 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	ZNF573	Q86YE8	665 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	CENPL	Q8N0S6	344 aa	Predicted RBP	2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	CSNK1A1L	Q8N752	337 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	ZPLD1	Q8TCW7	415 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	TMEM80	Q96HE8	168 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	TMEM121	Q9BTD3	319 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	THUMPD2	Q9BTF0	503 aa	Known RBP	2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	POLR3F	Q9H1D9	316 aa	Predicted RBP	2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	IKZF5	Q9H5V7	419 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	CALHM2	Q9HA72	323 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	SLC35D1	Q9NTN3	355 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044		Q9UF83	564 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	CRLS1	Q9UJA2	301 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	ATP6V0A2	Q9Y487	856 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	SPACA6	W5XKT8	324 aa		2.84	□□□□□ -1.95
PTCD3-209	ENST00000472044	ZNF646	O15015	1829 aa	Predicted RBP	2.84	□□□□□ -1.96
PTCD3-209	ENST00000472044	CROCC	Q5TZA2	2017 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	PPIAL4C	A0A0B4J2A2	164 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044		A0A1B0GVY2	172 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ESYT2	A0FGR8	921 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	FRG2C	A6NGY1	282 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	CYSRT1	A8MQ03	144 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	CDX4	O14627	284 aa	Predicted RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	MAPK13	O15264	365 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	CTAGE5	O15320	804 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	LAT	O43561	262 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	IFNB1	P01574	187 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	CD55	P08174	381 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	PPIAL4G	P0DN37	164 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	PDHB	P11177	359 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ANXA3	P12429	323 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	NCF1	P14598	390 aa	Predicted RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	DES	P17661	470 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	PSMA2	P25787	234 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	GDF1	P27539	372 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	POLR2F	P61218	127 aa	Known RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ZNF154	Q13106	437 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	SERTAD2	Q14140	314 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ATXN7L3	Q14CW9	347 aa	Predicted RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	PRR4	Q16378	134 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	GSG1	Q2KHT4	349 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	TEX44	Q53QW1	395 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	PVRIG	Q6DKI7	326 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ASPHD2	Q6ICH7	369 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	LANCL3	Q6ZV70	420 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	GET4	Q7L5D6	327 aa	Predicted RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	SERPINA9	Q86WD7	417 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	SPEM1	Q8N4L4	309 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ZNF525	Q8N782	197 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	OR9A4	Q8NGU2	314 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	CCDC26	Q8TAB7	109 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	NANP	Q8TBE9	248 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	IL1F10	Q8WWZ1	152 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	DHTKD1	Q96HY7	919 aa	Predicted RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	AKR1E2	Q96JD6	320 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ZNF416	Q9BWM5	594 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	DHX33	Q9H6R0	707 aa	Known RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	TNFRSF19	Q9NS68	423 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	VNN3	Q9NY84	501 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	UTP6	Q9NYH9	597 aa	Known RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	MRPL39	Q9NYK5	338 aa	Known RBP	2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	ABCD2	Q9UBJ2	740 aa		2.83	□□□□□ -1.96
PTCD3-209	ENST00000472044	SLC2A6	Q9UGQ3	507 aa		2.83	□□□□□ -1.96

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