RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 OR2V1Q8NHB1 315 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 FAM168AQ92567 244 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 KISS1RQ969F8 398 aaPredicted RBP16.88■□□□□ 0.29
SORT1-203ENST00000471996 CHODLQ9H9P2 273 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 TAS2R9Q9NYW1 312 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 ALPK2Q86TB3 2170 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 SLC35F4A4IF30 521 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 FAM159BA6NKW6 160 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 PLOD3O60568 738 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 SIX3O95343 332 aaPredicted RBP16.87■□□□□ 0.29
SORT1-203ENST00000471996 NTN1O95631 604 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 USF1P22415 310 aaPredicted RBP16.87■□□□□ 0.29
SORT1-203ENST00000471996 ARL1P40616 181 aaPredicted RBP16.87■□□□□ 0.29
SORT1-203ENST00000471996 CLK3P49761 638 aaKnown RBP16.87■□□□□ 0.29
SORT1-203ENST00000471996 TRA2BP62995 288 aaKnown RBP16.87■□□□□ 0.29
SORT1-203ENST00000471996 LSM11P83369 360 aaKnown RBP eCLIP16.87■□□□□ 0.293e-47■■■■■ 33.9
SORT1-203ENST00000471996 IFT88Q13099 833 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 RAB35Q15286 201 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 CYP27C1Q4G0S4 372 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 FAM166AQ6J272 317 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 METTL2BQ6P1Q9 378 aaKnown RBP16.87■□□□□ 0.29
SORT1-203ENST00000471996 CCDC25Q86WR0 208 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 C10orf105Q8TEF2 133 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 ATP6V1E2Q96A05 226 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 MTBPQ96DY7 904 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 SLC12A4Q9UP95 1085 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 VDAC3Q9Y277 283 aa16.87■□□□□ 0.29
SORT1-203ENST00000471996 CCDC189A1A4V9 331 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 TNFSF11O14788 317 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 KCNAB3O43448 404 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 GMFGO60234 142 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 ADAP00813 363 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 OPN1LWP04000 364 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 HNF1AP20823 631 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 CFPP27918 469 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 CCNG1P51959 295 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 C17orf67Q0P5P2 114 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 ITGADQ13349 1161 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 P2RY6Q15077 328 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 SGO1Q5FBB7 561 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 TMEM201Q5SNT2 666 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 SH2D4BQ5SQS7 431 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 GRTP1Q5TC63 336 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 ESPNLQ6ZVH7 1005 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 CYS1Q717R9 158 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 NUFIP2Q7Z417 695 aaKnown RBP16.86■□□□□ 0.29
SORT1-203ENST00000471996 MEX3DQ86XN8 651 aaKnown RBP16.86■□□□□ 0.29
SORT1-203ENST00000471996 CENPLQ8N0S6 344 aaPredicted RBP16.86■□□□□ 0.29
SORT1-203ENST00000471996 BANPQ8N9N5 519 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 OR7G2Q8NG99 324 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 PYROXD1Q8WU10 500 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 KCTD4Q8WVF5 259 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 HTRA1Q92743 480 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 CBLN4Q9NTU7 201 aa16.86■□□□□ 0.29
SORT1-203ENST00000471996 YLPM1P49750 1951 aaKnown RBP16.86■□□□□ 0.29
SORT1-203ENST00000471996 A0A0J9YW62 118 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 TCRBV9S1A1TA0A576 114 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 PABPC4LP0CB38 370 aaKnown RBP16.85■□□□□ 0.29
SORT1-203ENST00000471996 TTKP33981 857 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 RAC1P63000 192 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 ZNF155Q12901 538 aaPredicted RBP16.85■□□□□ 0.29
SORT1-203ENST00000471996 DECR1Q16698 335 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 HBMQ6B0K9 141 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 C12orf54Q6X4T0 127 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 BHLHA15Q7RTS1 189 aaPredicted RBP16.85■□□□□ 0.29
SORT1-203ENST00000471996 SAMD14Q8IZD0 417 aaPredicted RBP16.85■□□□□ 0.29
SORT1-203ENST00000471996 GTPBP8Q8N3Z3 284 aaPredicted RBP16.85■□□□□ 0.29
SORT1-203ENST00000471996 L2HGDHQ9H9P8 463 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 CADP27708 2225 aa16.85■□□□□ 0.29
SORT1-203ENST00000471996 A0A087WZY1 265 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 LOC100289279A0A1B0GTE1 492 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 ABCD4O14678 606 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 ESRRBO95718 433 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 ANGPTL1O95841 491 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 PSMA4P25789 261 aaKnown RBP16.84■□□□□ 0.29
SORT1-203ENST00000471996 DR1Q01658 176 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 ACAP2Q15057 778 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 PPA1Q15181 289 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 FAM83EQ2M2I3 478 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 PDSS1Q5T2R2 415 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 CTAGE3PQ8IX95 158 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 TUSC5Q8IXB3 177 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 RFLNBQ8N5W9 214 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 RNF128Q8TEB7 428 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 ABHD3Q8WU67 409 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 OSTF1Q92882 214 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 RADILQ96JH8 1075 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 NPAS1Q99742 590 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 TBL1XR1Q9BZK7 514 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 TRIM31Q9BZY9 425 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 ADAM19Q9H013 955 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 ELOVL6Q9H5J4 265 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 FARSBQ9NSD9 589 aaKnown RBP16.84■□□□□ 0.29
SORT1-203ENST00000471996 KLHL13Q9P2N7 655 aa16.84■□□□□ 0.29
SORT1-203ENST00000471996 E7EQL1 145 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 TCF21O43680 179 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 IL33O95760 270 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 CSF3P09919 207 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 CARD18P57730 90 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms