RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 APOOLQ6UXV4 268 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 SZRD1Q7Z422 152 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 EXOC3L1Q86VI1 746 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 CDRT4Q8N9R6 151 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 NUP43Q8NFH3 380 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 CLHC1Q8NHS4 586 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.33■□□□□ 0.854e-8■■■■■ 162.9
C9orf3-213ENST00000471978 FIG4Q92562 907 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 MBD6Q96DN6 1003 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 STARD4Q96DR4 205 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 PINK1Q9BXM7 581 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 PLEKHF2Q9H8W4 249 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 NDRG3Q9UGV2 375 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 TMED5Q9Y3A6 229 aa20.33■□□□□ 0.85
C9orf3-213ENST00000471978 IGLV3-32A0A0A0MS00 114 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 CASKO14936 926 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 LSM1O15116 133 aaKnown RBP20.32■□□□□ 0.84
C9orf3-213ENST00000471978 GMFGO60234 142 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 TNFRSF21O75509 655 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 NKX2-2O95096 273 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 ATE1O95260 518 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 HRGP04196 525 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 KLK2P20151 261 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 MAP3K8P41279 467 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 CLDN20P56880 219 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 PDE7AQ13946 482 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 KEAP1Q14145 624 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 GALNTL6Q49A17 601 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 VWA1Q6PCB0 445 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 GALNT10Q86SR1 603 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 DDIASQ8IXT1 998 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 OR2W6PQ8NHA6 318 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 SLC9A6Q92581 669 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 HOXB13Q92826 284 aaPredicted RBP20.32■□□□□ 0.84
C9orf3-213ENST00000471978 APOPT1Q96IL0 206 aa20.32■□□□□ 0.84
C9orf3-213ENST00000471978 ACANP16112 2415 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 CHRNGP07510 517 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 ALDH3A1P30838 453 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 FRKP42685 505 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-213ENST00000471978 FAM27E3Q08E93 113 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 FBXO30Q8TB52 745 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 SMPDL3BQ92485 455 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 GIMAP5Q96F15 307 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 PGM2Q96G03 612 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 L2HGDHQ9H9P8 463 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 ACSS1Q9NUB1 689 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-213ENST00000471978 MKS1Q9NXB0 559 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 NTMQ9P121 344 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 ZNF175Q9Y473 711 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 AP4B1Q9Y6B7 739 aa20.31■□□□□ 0.84
C9orf3-213ENST00000471978 FLNAP21333 2647 aaKnown RBP20.31■□□□□ 0.84
C9orf3-213ENST00000471978 TMEM233B4DJY2 109 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 DIAPH2O60879 1101 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 FGF4P08620 206 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 ACP2P11117 423 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 KIR2DL2P43627 348 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-213ENST00000471978 ASMTP46597 345 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 SIRPAP78324 504 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 PON3Q15166 354 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 BTLAQ7Z6A9 289 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 HOMEZQ8IX15 550 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 BANPQ8N9N5 519 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 FNDC9Q8TBE3 224 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 TWIST2Q8WVJ9 160 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 ZNF845Q96IR2 970 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-213ENST00000471978 MS4A4EQ96PG1 132 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 FAM111AQ96PZ2 611 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 TESMINQ9Y4I5 508 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 TRAF6Q9Y4K3 522 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 PCNX3Q9H6A9 2034 aa20.3■□□□□ 0.84
C9orf3-213ENST00000471978 SHISA8B8ZZ34 492 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 ALG1L2C9J202 215 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 EMC8O43402 210 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 NPHS1O60500 1241 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 BCKDHAP12694 445 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 EFNA1P20827 205 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-213ENST00000471978 RPS3AP61247 264 aaKnown RBP20.29■□□□□ 0.84
C9orf3-213ENST00000471978 DEFB113Q30KQ7 82 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 UGT3A2Q3SY77 523 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 ARL13AQ5H913 290 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-213ENST00000471978 FIGNL1Q6PIW4 674 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 R3HCC1LQ7Z5L2 792 aaKnown RBP20.29■□□□□ 0.84
C9orf3-213ENST00000471978 TRABD2AQ86V40 505 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 METTL25Q8N6Q8 603 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 SLC16A11Q8NCK7 471 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 OR4C3Q8NH37 302 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 MTERF3Q96E29 417 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 MECRQ9BV79 373 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 OPN3Q9H1Y3 402 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-213ENST00000471978 RNF122Q9H9V4 155 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 EML4Q9HC35 981 aaKnown RBP20.29■□□□□ 0.84
C9orf3-213ENST00000471978 HHATLQ9HCP6 504 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 EIF3LQ9Y262 564 aaKnown RBP20.29■□□□□ 0.84
C9orf3-213ENST00000471978 VDAC3Q9Y277 283 aa20.29■□□□□ 0.84
C9orf3-213ENST00000471978 PIP5K1BO14986 540 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 NDUFB5O43674 189 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 KCNK2O95069 426 aa20.28■□□□□ 0.84
C9orf3-213ENST00000471978 OXSR1O95747 527 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-213ENST00000471978 NGFRP08138 427 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms