RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TAS2R9Q9NYW1 312 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 PPP4R1LQ9P1A2 415 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 DNAJC15Q9Y5T4 150 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 ARID1AO14497 2285 aa7.27□□□□□ -1.25
USP48-207ENST00000471752 SONP18583 2426 aaKnown RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 A0A087WV62 115 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 SH3D21A4FU49 640 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 FAM47E-STBD1D6RA91 191 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 H3BML4 177 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 COPEO14579 308 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 AZIN1O14977 448 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 BCAS2O75934 225 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 SMNDC1O75940 238 aaKnown RBP eCLIP7.26□□□□□ -1.25
USP48-207ENST00000471752 RSL1D1O76021 490 aaKnown RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 ANGPTL1O95841 491 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 PLAUP00749 431 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 UROSP10746 265 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 BCKDHAP12694 445 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 CHMP24386 653 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 DNASE1P24855 282 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 EDNRAP25101 427 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 PSMA4P25789 261 aaKnown RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 CPOXP36551 454 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 DSCR4P56555 118 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 MRPS22P82650 360 aaKnown RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 EFR3AQ14156 821 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 RCAN2Q14206 197 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 GUSBP1Q15486 140 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 CD226Q15762 336 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 TOMM34Q15785 309 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 DUSP5Q16690 384 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 IMPG1Q17R60 797 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.26□□□□□ -1.25
USP48-207ENST00000471752 NDUFAF6Q330K2 333 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 GALNTL6Q49A17 601 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 CYP27C1Q4G0S4 372 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 ARL13AQ5H913 290 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 RAET1LQ5VY80 246 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 PAMR1Q6UXH9 720 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 CXorf67Q86X51 503 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 GRAMD2AQ8IUY3 354 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 BANPQ8N9N5 519 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 GOT1L1Q8NHS2 421 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 FAM110BQ8TC76 370 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 GPR151Q8TDV0 419 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 HOXB13Q92826 284 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 ERP27Q96DN0 273 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 PGM2Q96G03 612 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 ZC3HAV1LQ96H79 300 aaKnown RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 SH3YL1Q96HL8 342 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 FCRL1Q96LA6 429 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 SFXN3Q9BWM7 321 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 LRTM1Q9HBL6 345 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 SIRT3Q9NTG7 399 aaPredicted RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 GIMAP4Q9NUV9 329 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 DDX18Q9NVP1 670 aaKnown RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 C1orf109Q9NX04 203 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 SENP1Q9P0U3 644 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 SH3BP4Q9P0V3 963 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 VDAC3Q9Y277 283 aa7.26□□□□□ -1.25
USP48-207ENST00000471752 MRPS18CQ9Y3D5 142 aaKnown RBP7.26□□□□□ -1.25
USP48-207ENST00000471752 A0A0J9YW62 118 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 SLC22A20A6NK97 555 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 PIP5K1BO14986 540 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 LSM1O15116 133 aaKnown RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 PDPK1O15530 556 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 ITM2AO43736 263 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 PEX11AO75192 247 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 GLRA3O75311 464 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 LYPLA1O75608 230 aaPredicted RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 KCNK2O95069 426 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 NKX2-2O95096 273 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 SLU7O95391 586 aaKnown RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 OXSR1O95747 527 aaPredicted RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 PRPS2P11908 318 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 HOXC12P31275 282 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 KRT20P35900 424 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 CPA2P48052 419 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 CCT5P48643 541 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 PRIM2P49643 509 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 CASP9P55211 416 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 VSNL1P62760 191 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 RPL38P63173 70 aaKnown RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 PDE7AQ13946 482 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 PTGR1Q14914 329 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 PON3Q15166 354 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 TSC22D1Q15714 1073 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 BCL2A1Q16548 175 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 DECR1Q16698 335 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 EXOC3L2Q2M3D2 409 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 CTU2Q2VPK5 515 aaKnown RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 DEFB113Q30KQ7 82 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 CFAP157Q5JU67 520 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP48-207ENST00000471752 LIPMQ5VYY2 423 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 KANK2Q63ZY3 851 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 MFSD12Q6NUT3 480 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 CBLN3Q6UW01 205 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 ENPP6Q6UWR7 440 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 ATG4DQ86TL0 474 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms