RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 MBD3L3A6NE82 208 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 MBD3L5A6NJ08 208 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 AZIN1O14977 448 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 TBX19O60806 448 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 SEC22BO75396 215 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 JUNP05412 331 aaKnown RBP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 FGF4P08620 206 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 PSMD4P55036 377 aaKnown RBP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 ZNHIT3Q15649 155 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 SH2D4BQ5SQS7 431 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 DESI1Q6ICB0 168 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 ARSKQ6UWY0 536 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 NPSR1Q6W5P4 371 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 LARP4Q71RC2 724 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 C10orf107Q8IVU9 208 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 SLC44A2Q8IWA5 706 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 TNIP2Q8NFZ5 429 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 OR14L1PQ8NHC6 308 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 MBD3L2Q8NHZ7 208 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 CDC26Q8NHZ8 85 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 FCRL1Q96LA6 429 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 UCN2Q96RP3 112 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 SORT1Q99523 831 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 GLIPR2Q9H4G4 154 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 ANKRA2Q9H9E1 313 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 LRTM1Q9HBL6 345 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 NDE1Q9NXR1 346 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 MRTO4Q9UKD2 239 aaKnown RBP12.28□□□□□ -0.44
HMGN1-211ENST00000471260 MAPRE3Q9UPY8 281 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 CAMK2AQ9UQM7 478 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 OR10H1Q9Y4A9 318 aa12.28□□□□□ -0.44
HMGN1-211ENST00000471260 UPK1AO00322 258 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 NPHS1O60500 1241 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 IL18BPO95998 194 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 CYP4B1P13584 511 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 DDX5P17844 614 aaKnown RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 CHMP24386 653 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 MC3RP41968 323 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 ASCL1P50553 236 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 GFRA1P56159 465 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 MXRA7P84157 204 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 ZNF155Q12901 538 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 DECR1Q16698 335 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 CLEC6AQ6EIG7 209 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 Q6ZSR9 355 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 YRDCQ86U90 279 aaKnown RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 IFNEQ86WN2 208 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 ACTRT2Q8TDY3 377 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 RNASE6Q93091 150 aaKnown RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 ELP4Q96EB1 424 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 ZFP3Q96NJ6 502 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 AMDHD1Q96NU7 426 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 NR1H4Q96RI1 486 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 TRIB1Q96RU8 372 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 ZNF184Q99676 751 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 CCT7Q99832 543 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 GATA5Q9BWX5 397 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 C3orf14Q9HBI5 128 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 EML4Q9HC35 981 aaKnown RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 Q9N2J8 555 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 TNFRSF12AQ9NP84 129 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 SERHLQ9NQF3 203 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 SDHAF3Q9NRP4 125 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 DDX18Q9NVP1 670 aaKnown RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 TAS2R10Q9NYW0 307 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 ARMCX1Q9P291 453 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 PRPF19Q9UMS4 504 aaKnown RBP12.27□□□□□ -0.45
HMGN1-211ENST00000471260 ABCG2Q9UNQ0 655 aa12.27□□□□□ -0.45
HMGN1-211ENST00000471260 C2orf72A6NCS6 295 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 A6NHS1 94 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 H0Y3Z8 333 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 KRT36O76013 467 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 BMP5P22003 454 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 CTSSP25774 331 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 EVI2BP34910 448 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 OPRM1P35372 400 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 CPOXP36551 454 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 CLK3P49761 638 aaKnown RBP12.26□□□□□ -0.45
HMGN1-211ENST00000471260 GAS1P54826 345 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 DLX5P56178 289 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 EEF1A1P68104 462 aaKnown RBP12.26□□□□□ -0.45
HMGN1-211ENST00000471260 MYBPHQ13203 477 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 BCL2A1Q16548 175 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 PRSS53Q2L4Q9 553 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 DCST1Q5T197 706 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 EEF1A1P5Q5VTE0 462 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 KANK2Q63ZY3 851 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 TMEM107Q6UX40 140 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 ADGRE4PQ86SQ3 457 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 CDH24Q86UP0 819 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 RELL2Q8NC24 303 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-211ENST00000471260 NAXEQ8NCW5 288 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 ZFP28Q8NHY6 868 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 EFHD2Q96C19 240 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-211ENST00000471260 ZBED6CLQ96FA7 236 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-211ENST00000471260 EGLN2Q96KS0 407 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 LMF2Q9BU23 707 aaKnown RBP12.26□□□□□ -0.45
HMGN1-211ENST00000471260 HHATLQ9HCP6 504 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 CBLCQ9ULV8 474 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms