RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TOMM20Q15388 145 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 NNATQ16517 81 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 SPRED3Q2MJR0 410 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 CR1LQ2VPA4 569 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 ELOA3BQ3SY89 546 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 PRAMEF20Q5VT98 475 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 SLC48A1Q6P1K1 146 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 SCIMPQ6UWF3 145 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 DNAJC14Q6Y2X3 702 aaPredicted RBP5.27□□□□□ -1.57
VARS-222ENST00000470953 SH2D5Q6ZV89 423 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 C9orf40Q8IXQ3 194 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 DDIASQ8IXT1 998 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 SAMD14Q8IZD0 417 aaPredicted RBP5.27□□□□□ -1.57
VARS-222ENST00000470953 FAM9CQ8IZT9 166 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 ZNF321PQ8N8H1 164 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 GOLM1Q8NBJ4 401 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 ELOA3Q8NG57 546 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 OR10H5Q8NGA6 315 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 AGR3Q8TD06 166 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 ZNF721Q8TF20 911 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 AKAP1Q92667 903 aaKnown RBP eCLIP5.27□□□□□ -1.57
VARS-222ENST00000470953 HTRA1Q92743 480 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 NEUROG1Q92886 237 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 WDYHV1Q96HA8 205 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 SGCZQ96LD1 299 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 ZNF597Q96LX8 424 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 FAM111AQ96PZ2 611 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 BBS4Q96RK4 519 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 KCNA7Q96RP8 456 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 DOHHQ9BU89 302 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 ZNF717Q9BY31 904 aaPredicted RBP5.27□□□□□ -1.57
VARS-222ENST00000470953 ACPTQ9BZG2 426 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 WWTR1Q9GZV5 400 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 GSTO2Q9H4Y5 243 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 CHCHD3Q9NX63 227 aaKnown RBP5.27□□□□□ -1.57
VARS-222ENST00000470953 MCM8Q9UJA3 840 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 PPIEQ9UNP9 301 aaKnown RBP5.27□□□□□ -1.57
VARS-222ENST00000470953 CAMK2AQ9UQM7 478 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 DLGAP4Q9Y2H0 992 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 ASB4Q9Y574 426 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 TIMM22Q9Y584 194 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 PCDHA9Q9Y5H5 950 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 PTGDR2Q9Y5Y4 395 aa5.27□□□□□ -1.57
VARS-222ENST00000470953 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 LOC100289279A0A1B0GTE1 492 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 HRKO00198 91 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 PPP6CO00743 305 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 PGRMC2O15173 223 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 TRIM13O60858 407 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 TMCC2O75069 709 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 SPAG7O75391 227 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 ERLIN1O75477 346 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 TNFSF13O75888 250 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 RSL1D1O76021 490 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 ANXA4P09525 319 aaPredicted RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 NUDT17P0C025 328 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 SBK3P0C264 359 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 UROSP10746 265 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 IL12BP29460 328 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 GPC1P35052 558 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 SRP14P37108 136 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 HPCAL1P37235 193 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 GSTM5P46439 218 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 NCBP2P52298 156 aaKnown RBP eCLIP5.26□□□□□ -1.57
VARS-222ENST00000470953 DNAJB13P59910 316 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 RPL38P63173 70 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 GALNT1Q10472 559 aaPredicted RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 FAPQ12884 760 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 PCLAFQ15004 111 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 EBPQ15125 230 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 RPS6KA2Q15349 733 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 MPEG1Q2M385 716 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 TBCELQ5QJ74 424 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 SLC22A10Q63ZE4 541 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 CLEC6AQ6EIG7 209 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 MRM1Q6IN84 353 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 WDR93Q6P2C0 686 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 C10orf107Q8IVU9 208 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 PRR22Q8IZ63 422 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 SLC15A4Q8N697 577 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 ADCY4Q8NFM4 1077 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 OR7G1Q8NGA0 311 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 OR10G3Q8NGC4 313 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 OR52R1Q8NGF1 315 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 RAB3IL1Q8TBN0 382 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 MRAPQ8TCY5 172 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 AENQ8WTP8 325 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 MZB1Q8WU39 189 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 DIO2Q92813 273 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 CAVIN3Q969G5 261 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 GTPBP3Q969Y2 492 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 NTNG2Q96CW9 530 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 DTNBP1Q96EV8 351 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 TRMT61AQ96FX7 289 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 TUBA1CQ9BQE3 449 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 RHNO1Q9BSD3 238 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 TMEM204Q9BSN7 226 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 TRMOQ9BU70 441 aa5.26□□□□□ -1.57
VARS-222ENST00000470953 RBM4Q9BWF3 364 aaKnown RBP5.26□□□□□ -1.57
VARS-222ENST00000470953 SFXN3Q9BWM7 321 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms