RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 TNFP01375 233 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 CKMT1AP12532 417 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 CPMP14384 443 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 UGT2B7P16662 529 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 BMP7P18075 431 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 EN2P19622 333 aaPredicted RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 PEBP1P30086 187 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 GABRA5P31644 462 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SDC2P34741 201 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 TGFBR1P36897 503 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SOX3P41225 446 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 RABIFP47224 123 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SOX9P48436 509 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SEPHS1P49903 392 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 DGKEP52429 567 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SRP54P61011 504 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 PPP2CBP62714 309 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 PPP2CAP67775 309 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 CHRNEQ04844 493 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 FUT5Q11128 374 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SSX1Q16384 188 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 ZSWIM7Q19AV6 140 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 PGGHGQ32M88 737 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 TMEM196Q5HYL7 178 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 STEAP3Q658P3 488 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 TYW3Q6IPR3 259 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 HEPHL1Q6MZM0 1159 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 MZT2AQ6P582 158 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 FIGLAQ6QHK4 219 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 PRR23CQ6ZRP0 262 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 MBOAT2Q6ZWT7 520 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 USP53Q70EK8 1073 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 UBE2Q1Q7Z7E8 422 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 VRK2Q86Y07 508 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 PHC2Q8IXK0 858 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 FAM20CQ8IXL6 584 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 RNF113BQ8IZP6 322 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 ZNF619Q8N2I2 560 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 OR2L13Q8N349 312 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SLC43A2Q8N370 569 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 CLIP4Q8N3C7 705 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 COX18Q8N8Q8 333 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 GALNT11Q8NCW6 608 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 OR2T33Q8NG76 320 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 OR1E3Q8WZA6 343 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 HTRA1Q92743 480 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 DIO2Q92813 273 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 KAT2AQ92830 837 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 CDS1Q92903 461 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 C1GALT1C1Q96EU7 318 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 C16orf58Q96GQ5 468 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SLC41A3Q96GZ6 507 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 ZNF681Q96N22 645 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 NECTIN4Q96NY8 510 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 WDFY2Q96P53 400 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 STACQ99469 402 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 NEURL2Q9BR09 285 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 MED18Q9BUE0 208 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 MKRN2Q9H000 416 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 ADAM19Q9H013 955 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SLC38A1Q9H2H9 487 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 NKX2-4Q9H2Z4 354 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 PIGUQ9H490 435 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 ANKRA2Q9H9E1 313 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 HHATLQ9HCP6 504 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 CTPS2Q9NRF8 586 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 SNTG1Q9NSN8 517 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 MAN2C1Q9NTJ4 1040 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 MRPS18AQ9NVS2 196 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 NTMQ9P121 344 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 TBC1D29Q9UFV1 150 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 TESQ9UGI8 421 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 SATB2Q9UPW6 733 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 CLCA2Q9UQC9 943 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 GRIP1Q9Y3R0 1128 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 PLEKHM1Q9Y4G2 1056 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 CDH10Q9Y6N8 788 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 NINQ8N4C6 2090 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 ATG2AQ2TAZ0 1938 aa7.46□□□□□ -1.22
SMC4-212ENST00000470240 KIAA0100Q14667 2235 aaKnown RBP7.46□□□□□ -1.22
SMC4-212ENST00000470240 TICRRQ7Z2Z1 1910 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 A0A087WV62 115 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 KIR2DS5A0A0G2JLQ3 304 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 A0A0G2JNG1 304 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 A0A0J9YY10 115 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 PRAMEF27A3QJZ7 478 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 BLACEA4D250 179 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 OR6C74A6NCV1 312 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 UNC119BA6NIH7 251 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 KDM4EB2RXH2 506 aaPredicted RBP7.45□□□□□ -1.22
SMC4-212ENST00000470240 F8W735 103 aaPredicted RBP7.45□□□□□ -1.22
SMC4-212ENST00000470240 KIR2DS3K7RE56 304 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 SCAMP1O15126 338 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 PPM1DO15297 605 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 FMO6PO60774 539 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 GPX5O75715 221 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 CDRT1O95170 752 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 KRT8P05787 483 aa7.45□□□□□ -1.22
SMC4-212ENST00000470240 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms