RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 PRIM2P49643 509 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 RPL14P50914 215 aaKnown RBP12.74□□□□□ -0.37
COMMD3-208ENST00000470045 PRKAG1P54619 331 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 DIO3P55073 304 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 DLX5P56178 289 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 CLDN8P56748 225 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 BCL2A1Q16548 175 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 CPTPQ5TA50 214 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 APOOLQ6UXV4 268 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 SZRD1Q7Z422 152 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 MARCH3Q86UD3 253 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 LURAP1LQ8IV03 231 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 LRRC34Q8IZ02 419 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 NUDT8Q8WV74 236 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 SLC9A6Q92581 669 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 SFXN2Q96NB2 322 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 STACQ99469 402 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 SH3GL2Q99962 352 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 BHLHE41Q9C0J9 482 aaPredicted RBP12.74□□□□□ -0.37
COMMD3-208ENST00000470045 DSN1Q9H410 356 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 CXorf36Q9H7Y0 433 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 NEUROD4Q9HD90 331 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 DUSP22Q9NRW4 184 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 ZCCHC3Q9NUD5 404 aaKnown RBP12.74□□□□□ -0.37
COMMD3-208ENST00000470045 GIN1Q9NXP7 522 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 CLCF1Q9UBD9 225 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 EIF3LQ9Y262 564 aaKnown RBP12.74□□□□□ -0.37
COMMD3-208ENST00000470045 ANKHD1Q8IWZ3 2542 aaKnown RBP12.74□□□□□ -0.37
COMMD3-208ENST00000470045 CSMD1Q96PZ7 3565 aa12.74□□□□□ -0.37
COMMD3-208ENST00000470045 POLQO75417 2590 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 H0Y3Z8 333 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 DVL2O14641 736 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 OXSR1O95747 527 aaPredicted RBP12.73□□□□□ -0.37
COMMD3-208ENST00000470045 ANGPTL1O95841 491 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 C6orf47O95873 294 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 HMGN2P05204 90 aaKnown RBP12.73□□□□□ -0.37
COMMD3-208ENST00000470045 ALOX5P09917 674 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 RFX3P48380 749 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 STARP49675 285 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 CLK3P49761 638 aaKnown RBP12.73□□□□□ -0.37
COMMD3-208ENST00000470045 ASCL1P50553 236 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 WDR4P57081 412 aaKnown RBP12.73□□□□□ -0.37
COMMD3-208ENST00000470045 C17orf67Q0P5P2 114 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 STX5Q13190 355 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 BEND6Q5SZJ8 279 aaPredicted RBP12.73□□□□□ -0.37
COMMD3-208ENST00000470045 ZAR1Q86SH2 424 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 C9orf106Q8NAJ2 232 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 OR4C3Q8NH37 302 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 FBXO30Q8TB52 745 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 SFXN5Q8TD22 340 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 C1GALT1C1Q96EU7 318 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 C16orf58Q96GQ5 468 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 ZFP3Q96NJ6 502 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 PRPF18Q99633 342 aaKnown RBP12.73□□□□□ -0.37
COMMD3-208ENST00000470045 TBL1XR1Q9BZK7 514 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 PIGUQ9H490 435 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 AKTIPQ9H8T0 292 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 SLC24A3Q9HC58 644 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 MCCC2Q9HCC0 563 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 KCNK9Q9NPC2 374 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 GPATCH2Q9NW75 528 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 MED11Q9P086 117 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 KCNN3Q9UGI6 736 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 L3MBTL1Q9Y468 752 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 CSMD2Q7Z408 3487 aa12.73□□□□□ -0.37
COMMD3-208ENST00000470045 TMEM120BA0PK00 339 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 CLCA1A8K7I4 914 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 SYT5O00445 386 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 ANKRD28O15084 1053 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 IL18BPO95998 194 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 TBXA2RP21731 343 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 BMP5P22003 454 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 CCT3P49368 545 aaKnown RBP12.72□□□□□ -0.37
COMMD3-208ENST00000470045 SLC18A1P54219 525 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 KRTAP10-9P60411 292 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 TLE4Q04727 773 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 BST1Q10588 318 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 STX3Q13277 289 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 LASP1Q14847 261 aaKnown RBP12.72□□□□□ -0.37
COMMD3-208ENST00000470045 TMEM44Q2T9K0 475 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 LSM12Q3MHD2 195 aaKnown RBP12.72□□□□□ -0.37
COMMD3-208ENST00000470045 GLYR1Q49A26 553 aaPredicted RBP12.72□□□□□ -0.37
COMMD3-208ENST00000470045 CDC73Q6P1J9 531 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 COX18Q8N8Q8 333 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 OR56A1Q8NGH5 318 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 DUSP19Q8WTR2 217 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 WNT2BQ93097 391 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 MOAP1Q96BY2 351 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 ZBTB9Q96C00 473 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 OTUB1Q96FW1 271 aaPredicted RBP12.72□□□□□ -0.37
COMMD3-208ENST00000470045 DUSP26Q9BV47 211 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 BTBD2Q9BX70 525 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 PTGES2Q9H7Z7 377 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 MEAF6Q9HAF1 191 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 HHATLQ9HCP6 504 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 FBXO34Q9NWN3 711 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 JKAMPQ9P055 326 aa12.72□□□□□ -0.37
COMMD3-208ENST00000470045 RPH3AQ9Y2J0 694 aaPredicted RBP12.72□□□□□ -0.37
COMMD3-208ENST00000470045 ANKRD17O75179 2603 aaKnown RBP12.72□□□□□ -0.37
COMMD3-208ENST00000470045 A0A1W2PQD3 144 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms