RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CNPY4Q8N129 248 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 NUP43Q8NFH3 380 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 OR2T11Q8NH01 316 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 UBLCP1Q8WVY7 318 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-210ENST00000469897 SLC9A6Q92581 669 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 PIK3IP1Q96FE7 263 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 C16orf58Q96GQ5 468 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 BEX4Q9NWD9 120 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-210ENST00000469897 C1orf109Q9NX04 203 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 ELOVL5Q9NYP7 299 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 ZNF226Q9NYT6 803 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 SH3BP4Q9P0V3 963 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 VDAC3Q9Y277 283 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 TESMINQ9Y4I5 508 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 AP4B1Q9Y6B7 739 aa11.95□□□□□ -0.5
CPSF4-210ENST00000469897 DEFB108AA8MXU0 73 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 C16orf97H3BN30 126 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 EIF1AYO14602 144 aaKnown RBP11.94□□□□□ -0.5
CPSF4-210ENST00000469897 AZIN1O14977 448 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 PDPK1O15530 556 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 SIAH2O43255 324 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 AQP8O94778 261 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 NKX2-2O95096 273 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 KRT4P19013 534 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 PRPH2P23942 346 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 MAP3K8P41279 467 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 RPS3AP61247 264 aaKnown RBP11.94□□□□□ -0.5
CPSF4-210ENST00000469897 TMEM44Q2T9K0 475 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 LIPMQ5VYY2 423 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 PPP4R4Q6NUP7 873 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 FIGNL1Q6PIW4 674 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 FAM214BQ7L5A3 538 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 ZNF550Q7Z398 422 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 GGNQ86UU5 652 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 CXorf67Q86X51 503 aaPredicted RBP11.94□□□□□ -0.5
CPSF4-210ENST00000469897 C10orf107Q8IVU9 208 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 C4orf33Q8N1A6 199 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 GATSQ8NAP1 163 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 LRRN4CLQ8ND94 238 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 CEP70Q8NHQ1 597 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 CLHC1Q8NHS4 586 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 PPCDCQ96CD2 204 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 ZC3HAV1LQ96H79 300 aaKnown RBP11.94□□□□□ -0.5
CPSF4-210ENST00000469897 METTL2AQ96IZ6 378 aaKnown RBP11.94□□□□□ -0.5
CPSF4-210ENST00000469897 C18orf12Q96KH6 178 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 TSSK3Q96PN8 268 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 NPAS1Q99742 590 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 MED18Q9BUE0 208 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 GATA5Q9BWX5 397 aaPredicted RBP11.94□□□□□ -0.5
CPSF4-210ENST00000469897 PRRG4Q9BZD6 226 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 KLHL4Q9C0H6 718 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 TUBB1Q9H4B7 451 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 REEP4Q9H6H4 257 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 FBXO34Q9NWN3 711 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 CLEC4AQ9UMR7 237 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 ZNF175Q9Y473 711 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 ITPR3Q14573 2671 aa11.94□□□□□ -0.5
CPSF4-210ENST00000469897 IGLV3-32A0A0A0MS00 114 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 TTC36A6NLP5 189 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 NDUFB5O43674 189 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 CD8BP10966 210 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 SDC1P18827 310 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 EIF1AXP47813 144 aaKnown RBP11.93□□□□□ -0.5
CPSF4-210ENST00000469897 SLC6A8P48029 635 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 PCYT1AP49585 367 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 EXOC3L2Q2M3D2 409 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 VPS26BQ4G0F5 336 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 SZRD1Q7Z422 152 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 KRTAP1-3Q8IUG1 177 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 METTL25Q8N6Q8 603 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 CDRT4Q8N9R6 151 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 SLC16A11Q8NCK7 471 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 FBXO30Q8TB52 745 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 FAM110BQ8TC76 370 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 EPS8L3Q8TE67 593 aaKnown RBP11.93□□□□□ -0.5
CPSF4-210ENST00000469897 HOXB13Q92826 284 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-210ENST00000469897 OTUB1Q96FW1 271 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-210ENST00000469897 IQCGQ9H095 443 aaKnown RBP11.93□□□□□ -0.5
CPSF4-210ENST00000469897 PROCRQ9UNN8 238 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
CPSF4-210ENST00000469897 MTORP42345 2549 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 TLDC2A0PJX2 215 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 ALG1L2C9J202 215 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 NPIPB8E9PQR5 432 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 TBX19O60806 448 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 TRIM13O60858 407 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 KCNK2O95069 426 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 OXSR1O95747 527 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-210ENST00000469897 INHBBP09529 407 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 IFI6P09912 130 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 ACP2P11117 423 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 EFNA1P20827 205 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-210ENST00000469897 TBXA2RP21731 343 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 CRYGSP22914 178 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 ADSLP30566 484 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-210ENST00000469897 RPL38P63173 70 aaKnown RBP11.92□□□□□ -0.5
CPSF4-210ENST00000469897 OCRLQ01968 901 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 SLC18A2Q05940 514 aa11.92□□□□□ -0.5
CPSF4-210ENST00000469897 ACKR1Q16570 336 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms