RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 MADCAM1Q13477 382 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 LARS2Q15031 903 aaKnown RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF542PQ5EBM4 170 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 LAPTM4BQ86VI4 370 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 OR8H2Q8N162 312 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 DCLRE1CQ96SD1 692 aaKnown RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 MTHFD2LQ9H903 347 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-205ENST00000469687 STARD5Q9NSY2 213 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 IL20Q9NYY1 176 aa13.68□□□□□ -0.22
CBWD3-205ENST00000469687 LAMA1P25391 3075 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 FAM183AA6NL82 134 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 SNX4O95219 450 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 APBB3O95704 486 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 HTR2AP28223 471 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 SDC2P34741 201 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 CAV3P56539 151 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 EXOSC7Q15024 291 aaKnown RBP13.67□□□□□ -0.22
CBWD3-205ENST00000469687 BAK1Q16611 211 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 AADACL4Q5VUY2 407 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 HSDL2Q6YN16 418 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 MBOAT2Q6ZWT7 520 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 USP53Q70EK8 1073 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 GJD3Q8N144 294 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF485Q8NCK3 441 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 ZFPM2Q8WW38 1151 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 ASB12Q8WXK4 309 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 C1GALT1C1Q96EU7 318 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 SAMD8Q96LT4 415 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 PRSS27Q9BQR3 290 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 ANKRD19PQ9H560 264 aa13.67□□□□□ -0.22
CBWD3-205ENST00000469687 TMEM129A0AVI4 362 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 SOCS6O14544 535 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 SNPHO15079 494 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 OR5F1O95221 314 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 CTSBP07858 339 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 CT62P0C5K7 136 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 TLX1P31314 330 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 SHC2P98077 582 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 FABP5Q01469 135 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 INSL4Q14641 139 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 PGGHGQ32M88 737 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 PLK5Q496M5 336 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 CRTC2Q53ET0 693 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 FHL5Q5TD97 284 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 TMPRSS11AQ6ZMR5 421 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 TRIM48Q8IWZ4 208 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 PFN4Q8NHR9 129 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 RPLP0P6Q8NHW5 317 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ZFYVE21Q9BQ24 234 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF649Q9BS31 505 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 DPH1Q9BZG8 443 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ENKD1Q9H0I2 346 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 MIXL1Q9H2W2 232 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ABCB9Q9NP78 766 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 HINT3Q9NQE9 182 aaKnown RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 C20orf141Q9NUB4 165 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 PLEKHB1Q9UF11 243 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 A8MU76 341 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 IFNA8P32881 189 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 STAT5AP42229 794 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 SLC1A3P43003 542 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 FXYD6P3P58550 94 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 SRSF5Q13243 272 aaKnown RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 HTR4Q13639 388 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF791Q3KP31 576 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 FIGNL1Q6PIW4 674 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 Q6ZSR6 202 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF438Q7Z4V0 828 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 SLC22A18ASQ8N1D0 253 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 FLCNQ8NFG4 579 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 NR4A3Q92570 626 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 OSTF1Q92882 214 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 OTULINQ96BN8 352 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 GAS2L1Q99501 681 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ARHGAP9Q9BRR9 750 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 CCDC32Q9BV29 185 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF350Q9GZX5 532 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 FBRSQ9HAH7 460 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 SLC28A3Q9HAS3 691 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ATP13A2Q9NQ11 1180 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 TIGARQ9NQ88 270 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 WDR70Q9NW82 654 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 PAIP2BQ9ULR5 123 aaKnown RBP13.66□□□□□ -0.22
CBWD3-205ENST00000469687 SCML1Q9UN30 329 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 PIAS3Q9Y6X2 628 aa13.66□□□□□ -0.22
CBWD3-205ENST00000469687 ZC3H12DA2A288 527 aaKnown RBP13.65□□□□□ -0.22
CBWD3-205ENST00000469687 STK25O00506 426 aa13.65□□□□□ -0.22
CBWD3-205ENST00000469687 ZGLP1P0C6A0 271 aa13.65□□□□□ -0.22
CBWD3-205ENST00000469687 NT5EP21589 574 aa13.65□□□□□ -0.22
CBWD3-205ENST00000469687 GCGRP47871 477 aa13.65□□□□□ -0.22
CBWD3-205ENST00000469687 PLAURQ03405 335 aa13.65□□□□□ -0.22
CBWD3-205ENST00000469687 ZNF155Q12901 538 aaPredicted RBP13.65□□□□□ -0.22
CBWD3-205ENST00000469687 DUSP8Q13202 625 aa13.65□□□□□ -0.22
CBWD3-205ENST00000469687 TPBGQ13641 420 aa13.65□□□□□ -0.22
CBWD3-205ENST00000469687 DCST2Q5T1A1 773 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms