RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 RPS13P62277 151 aaKnown RBP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SSBP2P81877 361 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF33BQ06732 778 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 KLC1Q07866 573 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 STX4Q12846 297 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 DOC2AQ14183 400 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 NSDHLQ15738 373 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 EXT1Q16394 746 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 COLEC12Q5KU26 742 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SH2D4BQ5SQS7 431 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 CEP85LQ5SZL2 805 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 AGAP7PQ5VUJ5 663 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 FAM198BQ6UWH4 519 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 GPRIN3Q6ZVF9 776 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 GOLGA7Q7Z5G4 137 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 KLHDC8AQ8IYD2 350 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 CENPLQ8N0S6 344 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 ZADH2Q8N4Q0 377 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 MREGQ8N565 214 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 HORMAD2Q8N7B1 307 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF740Q8NDX6 193 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 OR2L5Q8NG80 312 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 OR4K1Q8NGD4 311 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 OR9A4Q8NGU2 314 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SELENOMQ8WWX9 145 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 HTRA1Q92743 480 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 APOPT1Q96IL0 206 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 ART5Q96L15 291 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF285Q96NJ3 590 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 AGAP4Q96P64 663 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 LPAR4Q99677 370 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 NRTNQ99748 197 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 PELOQ9BRX2 385 aaKnown RBP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 TBCDQ9BTW9 1192 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 TRMOQ9BU70 441 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 TUBB6Q9BUF5 446 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 FAIM2Q9BWQ8 316 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SLC25A18Q9H1K4 315 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 NOL11Q9H8H0 719 aaKnown RBP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SEMA4BQ9NPR2 832 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 GIMAP4Q9NUV9 329 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 LYARQ9NX58 379 aaKnown RBP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 HCN3Q9P1Z3 774 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 COPS7AQ9UBW8 275 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 IL17BQ9UHF5 180 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 SLC13A4Q9UKG4 626 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 PSME2Q9UL46 239 aa5.8□□□□□ -1.48
PTCD3-208ENST00000469585 MRPS18BQ9Y676 258 aaKnown RBP5.8□□□□□ -1.48
PTCD3-208ENST00000469585 DCHS1Q96JQ0 3298 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SDK2Q58EX2 2172 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 IGKV1-8A0A0C4DH67 115 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 GNG14A0A1W2PPG7 69 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 A6NL46 340 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 H0YIV9 168 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 FOXE1O00358 373 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 GALR3O60755 368 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 B4GALT2O60909 372 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ALOX12BO75342 701 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 RDH16O75452 317 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 NEURL1O76050 574 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ZWINTO95229 277 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 HPP00738 406 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 HLA-DQA2P01906 255 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 STATHP02808 62 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 FHP07954 510 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 TNNI3P19429 210 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 IMPDH1P20839 514 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 CPN2P22792 545 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ALDH3A1P30838 453 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SERPINB5P36952 375 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 CASP2P42575 452 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 MAGEA12P43365 314 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 MTNR1AP48039 350 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 CPA2P48052 419 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 GABRA4P48169 554 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 OR4D2P58180 307 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 C21orf58P58505 322 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ACSM2AQ08AH3 577 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 TBL3Q12788 808 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 LCP2Q13094 533 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SERTAD2Q14140 314 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ABRAXAS2Q15018 415 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 MIDNQ504T8 468 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SPIN4Q56A73 249 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 HSP90B2PQ58FF3 399 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 FBXO48Q5FWF7 155 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 INTS11Q5TA45 600 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 HHATQ5VTY9 493 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 KHDRBS2Q5VWX1 349 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 FRG2Q64ET8 278 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ACSM2BQ68CK6 577 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 FAAH2Q6GMR7 532 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SLC2A7Q6PXP3 512 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 LRIG3Q6UXM1 1119 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ZYG11AQ6WRX3 759 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF517Q6ZMY9 492 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ASB18Q6ZVZ8 466 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 NDUFAF7Q7L592 441 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms