RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 NICN1Q9BSH3 213 aa2.18□□□□□ -2.06
TPR-204ENST00000469463 TBC1D10AQ9BXI6 508 aa2.18□□□□□ -2.06
TPR-204ENST00000469463 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.18□□□□□ -2.06
TPR-204ENST00000469463 PTPRUQ92729 1446 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 SLC9B1P1A6NJY1 282 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 H3BTX0 84 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 ABCD4O14678 606 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 SSX5O60225 188 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 MMP23AO75900 390 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 TOXO94900 526 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 CXCL10P02778 98 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 ADORA2BP29275 332 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 PTPN6P29350 595 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 GCKP35557 465 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 NOVA1P51513 510 aaKnown RBP2.17□□□□□ -2.06
TPR-204ENST00000469463 PSG7Q13046 419 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 TFDP1Q14186 410 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 CYBRD1Q53TN4 286 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 SPATA46Q5T0L3 261 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 LEG1Q6P5S2 330 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 OLFM4Q6UX06 510 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 PAQR9Q6ZVX9 377 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 C1orf186Q6ZWK4 172 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 RABEPKQ7Z6M1 372 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 ZNF589Q86UQ0 364 aaPredicted RBP2.17□□□□□ -2.06
TPR-204ENST00000469463 VPS36Q86VN1 386 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 ZSCAN4Q8NAM6 433 aaPredicted RBP2.17□□□□□ -2.06
TPR-204ENST00000469463 BBS1Q8NFJ9 593 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 UPRTQ96BW1 309 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 FGGYQ96C11 551 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 ZNF799Q96GE5 643 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 SMIM14Q96QK8 99 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 WRAP53Q9BUR4 548 aaKnown RBP2.17□□□□□ -2.06
TPR-204ENST00000469463 ZNF702PQ9H963 129 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 ROPN1Q9HAT0 212 aaPredicted RBP2.17□□□□□ -2.06
TPR-204ENST00000469463 TRPV5Q9NQA5 729 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 YAE1D1Q9NRH1 226 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 ANO10Q9NW15 660 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 P2RX2Q9UBL9 471 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 IL19Q9UHD0 177 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 DUSP12Q9UNI6 340 aa2.17□□□□□ -2.06
TPR-204ENST00000469463 RPH3AQ9Y2J0 694 aaPredicted RBP2.17□□□□□ -2.06
TPR-204ENST00000469463 DHX29Q7Z478 1369 aaKnown RBP2.17□□□□□ -2.06
TPR-204ENST00000469463 WI2-2373I1.2A0A1W2PRP0 233 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 ZSCAN5BA6NJL1 495 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 ZNF861PO60384 105 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 STX11O75558 287 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 SCRG1O75711 98 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 KRT6AP02538 564 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 KRT6BP04259 564 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 ALPPP05187 535 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 ALPPL2P10696 532 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 GABRR1P24046 479 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 ATP5A1P25705 553 aaKnown RBP2.16□□□□□ -2.06
TPR-204ENST00000469463 EPHX2P34913 555 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 KRT6CP48668 564 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 UCNP55089 124 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 EXOSC2Q13868 293 aaKnown RBP2.16□□□□□ -2.06
TPR-204ENST00000469463 PDK1Q15118 436 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 ZNF658BQ4V348 819 aaPredicted RBP2.16□□□□□ -2.06
TPR-204ENST00000469463 METTL11BQ5VVY1 283 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 HSD11B1LQ7Z5J1 315 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 EFCAB13Q8IY85 973 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 KDM8Q8N371 416 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 OR56B1Q8NGI3 324 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 C18orf25Q96B23 403 aaPredicted RBP2.16□□□□□ -2.06
TPR-204ENST00000469463 ELSPBP1Q96BH3 223 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 ZNF285Q96NJ3 590 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 GSDMCQ9BYG8 508 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 CRNKL1Q9BZJ0 848 aaKnown RBP2.16□□□□□ -2.06
TPR-204ENST00000469463 ATG10Q9H0Y0 220 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 NANOGQ9H9S0 305 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 FANCFQ9NPI8 374 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 UTP6Q9NYH9 597 aaKnown RBP2.16□□□□□ -2.06
TPR-204ENST00000469463 CD274Q9NZQ7 290 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 SPASTQ9UBP0 616 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 XPO7Q9UIA9 1087 aaKnown RBP2.16□□□□□ -2.06
TPR-204ENST00000469463 ZNF221Q9UK13 617 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 L3MBTL1Q9Y468 752 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 MAB21L2Q9Y586 359 aa2.16□□□□□ -2.06
TPR-204ENST00000469463 ANKRD30BQ9BXX2 1392 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 FAM74A7A6NL05 159 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 LRRC30A6NM36 301 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 WASHC1A8K0Z3 465 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 TM9SF1O15321 606 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 LATO43561 262 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 NDUFA7O95182 113 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 CA3P07451 260 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 STSP08842 583 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 RRASP10301 218 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 H2AFXP16104 143 aaPredicted RBP2.15□□□□□ -2.07
TPR-204ENST00000469463 CDH5P33151 784 aaPredicted RBP2.15□□□□□ -2.07
TPR-204ENST00000469463 RPL29P47914 159 aaKnown RBP2.15□□□□□ -2.07
TPR-204ENST00000469463 YBEYP58557 167 aaPredicted RBP2.15□□□□□ -2.07
TPR-204ENST00000469463 RND3P61587 244 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 RPL8P62917 257 aaKnown RBP2.15□□□□□ -2.07
TPR-204ENST00000469463 VLDLRP98155 873 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 BDH1Q02338 343 aa2.15□□□□□ -2.07
TPR-204ENST00000469463 OC90Q02509 493 aaPredicted RBP2.15□□□□□ -2.07
TPR-204ENST00000469463 GABPB1Q06547 395 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms