RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TEX37Q96LM6 180 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 VKORC1Q9BQB6 163 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 NXF5Q9H1B4 397 aaKnown RBP13.27□□□□□ -0.28
COL27A1-203ENST00000468565 PROK2Q9HC23 129 aa13.27□□□□□ -0.28
COL27A1-203ENST00000468565 POLR3HQ9Y535 204 aaPredicted RBP13.27□□□□□ -0.28
COL27A1-203ENST00000468565 CACNA1DQ01668 2161 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 A0A1B0GVC2 190 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 LSM1O15116 133 aaKnown RBP13.27□□□□□ -0.29
COL27A1-203ENST00000468565 ACOX3O15254 700 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 ZNHIT1O43257 154 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 HNRNPRO43390 633 aaKnown RBP13.27□□□□□ -0.29
COL27A1-203ENST00000468565 PCSK2P16519 638 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 PSMA4P25789 261 aaKnown RBP13.27□□□□□ -0.29
COL27A1-203ENST00000468565 ABCD3P28288 659 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 RPS6KA3P51812 740 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 SMSP52788 366 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 C2orf80Q0P641 193 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 KIAA0040Q15053 153 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 TIGD2Q4W5G0 525 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 FAM71E1Q6IPT2 247 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 NOXRED1Q6NXP6 359 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 XKRXQ6PP77 449 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 OR52R1Q8NGF1 315 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 SPPL2AQ8TCT8 520 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 LCORQ96JN0 433 aaPredicted RBP13.27□□□□□ -0.29
COL27A1-203ENST00000468565 ZBTB18Q99592 522 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 KCTD14Q9BQ13 255 aaPredicted RBP13.27□□□□□ -0.29
COL27A1-203ENST00000468565 ITPAQ9BY32 194 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 YIPF3Q9GZM5 350 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 CCM2LQ9NUG4 571 aaPredicted RBP13.27□□□□□ -0.29
COL27A1-203ENST00000468565 TAS2R7Q9NYW3 318 aa13.27□□□□□ -0.29
COL27A1-203ENST00000468565 EIF3LQ9Y262 564 aaKnown RBP13.27□□□□□ -0.29
COL27A1-203ENST00000468565 KLF2Q9Y5W3 355 aaPredicted RBP13.27□□□□□ -0.29
COL27A1-203ENST00000468565 MAST4O15021 2626 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 ARHGAP21Q5T5U3 1957 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 DHRS12A0PJE2 317 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 OR14I1A6ND48 311 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 MYO1GB0I1T2 1018 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 PDE9AO76083 593 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 TPOP07202 933 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 MPIP34949 423 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 MAGEA5P43359 124 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 GSK3BP49841 420 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 EMDP50402 254 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 FBXW4P57775 412 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 PAGE3Q5JUK9 113 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 RNF220Q5VTB9 566 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 TMEM64Q6YI46 380 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 TRILQ7L0X0 811 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 CD163Q86VB7 1156 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 FAM9CQ8IZT9 166 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 DPP10Q8N608 796 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 ANKFN1Q8N957 763 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 SIMC1Q8NDZ2 872 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 OR9A2Q8NGT5 310 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 CANT1Q8WVQ1 401 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 DIO2Q92813 273 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 DMRTA2Q96SC8 542 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 SEMA6AQ9H2E6 1030 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 ALG2Q9H553 416 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 ZNF703Q9H7S9 590 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-203ENST00000468565 ZFP64Q9NPA5 681 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 MIEF1Q9NQG6 463 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 C1orf109Q9NX04 203 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 QPCTLQ9NXS2 382 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 GMPR2Q9P2T1 348 aaKnown RBP13.26□□□□□ -0.29
COL27A1-203ENST00000468565 UNC79Q9P2D8 2635 aa13.26□□□□□ -0.29
COL27A1-203ENST00000468565 LRRC3CA6NJW4 275 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 C3orf80F5H4A9 247 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 ADAM10O14672 748 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 ARPC2O15144 300 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 TO15178 435 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 AKAP10O43572 662 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 SEC22BO75396 215 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 PPM1BO75688 479 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 SLITRK5O94991 958 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 GPIP06744 558 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 ZNF26P17031 533 aaPredicted RBP13.25□□□□□ -0.29
COL27A1-203ENST00000468565 DRD5P21918 477 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 COL8A1P27658 744 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 IL12AP29459 219 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 DCTP40126 519 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 PPICP45877 212 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 LIPEQ05469 1076 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 SLC10A1Q14973 349 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 TMEM81Q6P7N7 255 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 SLC34A3Q8N130 599 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 OR5M3Q8NGP4 307 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 CDC26Q8NHZ8 85 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 FCRL1Q96LA6 429 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 BBS4Q96RK4 519 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 DOHHQ9BU89 302 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 TP63Q9H3D4 680 aaPredicted RBP13.25□□□□□ -0.29
COL27A1-203ENST00000468565 COQ10BQ9H8M1 238 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 LRTM1Q9HBL6 345 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 EGFL7Q9UHF1 273 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 FRG2CA6NGY1 282 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 AQP7O14520 342 aa13.25□□□□□ -0.29
COL27A1-203ENST00000468565 BCKDKO14874 412 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms