RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 FAM110BQ8TC76 370 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 OR5P2Q8WZ92 322 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 ARL8AQ96BM9 186 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 EFHD2Q96C19 240 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-205ENST00000468338 FAM120BQ96EK7 910 aaKnown RBP10.15□□□□□ -0.78
COL4A6-205ENST00000468338 MS4A4EQ96PG1 132 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 TIMP4Q99727 224 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 TTYH2Q9BSA4 534 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 OR2B2Q9GZK3 357 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 LDAHQ9H6V9 325 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 Q9N2J8 555 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 ATAD3AQ9NVI7 634 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 PNPOQ9NVS9 261 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 GIN1Q9NXP7 522 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 KLRF1Q9NZS2 232 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 ABCG2Q9UNQ0 655 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 MAPRE3Q9UPY8 281 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 MRPS18CQ9Y3D5 142 aaKnown RBP10.15□□□□□ -0.78
COL4A6-205ENST00000468338 OR10H1Q9Y4A9 318 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 WIF1Q9Y5W5 379 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 CENPEQ02224 2701 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 ITPR2Q14571 2701 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 A0A1W2PRB8 838 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 KLF11O14901 512 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 SCN2BO60939 215 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 CLDN14O95500 239 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 GABRA1P14867 456 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 IL12BP29460 328 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 GABRA3P34903 492 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 EVI2BP34910 448 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 PTGER4P35408 488 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 KRT20P35900 424 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 DIO3P55073 304 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 WNT3P56703 355 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 OCRLQ01968 901 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 EIPR1Q53HC9 387 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 WIPI1Q5MNZ9 446 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-205ENST00000468338 SP5Q6BEB4 398 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-205ENST00000468338 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 MFSD12Q6NUT3 480 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 ACAD11Q709F0 780 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 LILRB2Q8N423 598 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 FADS6Q8N9I5 356 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 SLC16A11Q8NCK7 471 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 FAM83FQ8NEG4 500 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-205ENST00000468338 OR8J2Q8NGG1 315 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 OR5M9Q8NGP3 310 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 PRPF18Q99633 342 aaKnown RBP10.14□□□□□ -0.79
COL4A6-205ENST00000468338 PAIP2Q9BPZ3 127 aaKnown RBP10.14□□□□□ -0.79
COL4A6-205ENST00000468338 DUSP26Q9BV47 211 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 NUF2Q9BZD4 464 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 RTN4RQ9BZR6 473 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 PRDM14Q9GZV8 571 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 C3orf14Q9HBI5 128 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 CHST11Q9NPF2 352 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 FAM120CQ9NX05 1096 aaKnown RBP10.14□□□□□ -0.79
COL4A6-205ENST00000468338 FLRT3Q9NZU0 649 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 GDF2Q9UK05 429 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-205ENST00000468338 MRTO4Q9UKD2 239 aaKnown RBP10.14□□□□□ -0.79
COL4A6-205ENST00000468338 ACAD8Q9UKU7 415 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 HCFC1P51610 2035 aa10.14□□□□□ -0.79
COL4A6-205ENST00000468338 hCG_2014768A0A024R1R8 64 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 IGLV3-32A0A0A0MS00 114 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 GXYLT2A0PJZ3 443 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 AHRRA9YTQ3 701 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 PRSS44E7EML9 344 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 LINC01387J3KSC0 135 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 SDHDO14521 159 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 HDAC3O15379 428 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 ZIC3O60481 467 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 TRAPPC6AO75865 159 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 SOX30O94993 753 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 HTR3BO95264 441 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 IGKV1D-16P01601 117 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 NGFRP08138 427 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 GLI4P10075 376 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 ACP2P11117 423 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 H2AFXP16104 143 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-205ENST00000468338 BMP7P18075 431 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 LBPP18428 481 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 EFNA1P20827 205 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-205ENST00000468338 HTR1EP28566 365 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 SRD5A2P31213 254 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 TRPC1P48995 793 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 PSMD4P55036 377 aaKnown RBP10.13□□□□□ -0.79
COL4A6-205ENST00000468338 GFRA1P56159 465 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 NUP107P57740 925 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 PHC1P78364 1004 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 PRR5P85299 388 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 PMPCAQ10713 525 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 DUSP5Q16690 384 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL4A6-205ENST00000468338 LSM12Q3MHD2 195 aaKnown RBP10.13□□□□□ -0.79
COL4A6-205ENST00000468338 VPS26BQ4G0F5 336 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 ZNF585AQ6P3V2 769 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 APOOLQ6UXV4 268 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 B3GNT6Q6ZMB0 384 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 SEM1Q6ZVN7 128 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 ULK2Q8IYT8 1036 aa10.13□□□□□ -0.79
COL4A6-205ENST00000468338 LILRB4Q8NHJ6 448 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms