RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 TMEM185BQ9H7F4 350 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 MYNNQ9NPC7 610 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 CD274Q9NZQ7 290 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 CAPN6Q9Y6Q1 641 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 M0R1B8 84 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 KRT14P02533 472 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 CT45A8P0DMV1 189 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 CT45A9P0DMV2 189 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 PCSK2P16519 638 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 GGT1P19440 569 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 EPHA1P21709 976 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 CD40P25942 277 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 PTX3P26022 381 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-203ENST00000467533 ARFIP2P53365 341 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 SNRPD2P62316 118 aaKnown RBP9.01□□□□□ -0.97
HDAC3-203ENST00000467533 E2F2Q14209 437 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 MLC1Q15049 377 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 RNPS1Q15287 305 aaKnown RBP9.01□□□□□ -0.97
HDAC3-203ENST00000467533 ZNF239Q16600 458 aaKnown RBP9.01□□□□□ -0.97
HDAC3-203ENST00000467533 CT45A2Q5DJT8 189 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 SPANXN3Q5MJ09 141 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 NPSR1Q6W5P4 371 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 Q6ZT83 130 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 ESPNLQ6ZVH7 1005 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 SLC46A3Q7Z3Q1 461 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 TBC1D1Q86TI0 1168 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-203ENST00000467533 ANKS4BQ8N8V4 417 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 VRK1Q99986 396 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-203ENST00000467533 PRSS50Q9UI38 385 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 ABCG2Q9UNQ0 655 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 USP22Q9UPT9 525 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 ZKSCAN5Q9Y2L8 839 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 OR10H1Q9Y4A9 318 aa9.01□□□□□ -0.97
HDAC3-203ENST00000467533 ARFGEF3Q5TH69 2177 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 A0A0J9YW62 118 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 FAM95CA0A1B0GW59 222 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 OR5H1A6NKK0 313 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 ZNF814B7Z6K7 855 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 NME6O75414 186 aaPredicted RBP9□□□□□ -0.97
HDAC3-203ENST00000467533 IL33O95760 270 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 TTC4O95801 387 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 ARAFP10398 606 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 CSNK2A2P19784 350 aaPredicted RBP9□□□□□ -0.97
HDAC3-203ENST00000467533 ME2P23368 584 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 ZFP36P26651 326 aaKnown RBP9□□□□□ -0.97
HDAC3-203ENST00000467533 APOBEC3AP31941 199 aaPredicted RBP9□□□□□ -0.97
HDAC3-203ENST00000467533 CLK3P49761 638 aaKnown RBP9□□□□□ -0.97
HDAC3-203ENST00000467533 TAS2R39P59534 338 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 PSPHP78330 225 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 PHC1P78364 1004 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 CHRNEQ04844 493 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 CCNIQ14094 377 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 ZSWIM7Q19AV6 140 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 ERCC6LQ2NKX8 1250 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 TMEM44Q2T9K0 475 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 TCHHL1Q5QJ38 904 aaPredicted RBP9□□□□□ -0.97
HDAC3-203ENST00000467533 TEDDM1Q5T9Z0 273 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 UGT2A3Q6UWM9 527 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 P2RY8Q86VZ1 359 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 SLC44A2Q8IWA5 706 aaPredicted RBP9□□□□□ -0.97
HDAC3-203ENST00000467533 SPATA6LQ8N4H0 392 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 PDPRQ8NCN5 879 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 OR4N2Q8NGD1 307 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 OR52N5Q8NH56 324 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 FBF1Q8TES7 1133 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 DUSP19Q8WTR2 217 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 KLHL29Q96CT2 875 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 PKP2Q99959 881 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 RTN4RQ9BZR6 473 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 CD244Q9BZW8 370 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 TSPY26PQ9H489 355 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 ANKRA2Q9H9E1 313 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 SAYSD1Q9NPB0 183 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 FLRT3Q9NZU0 649 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 PTGDR2Q9Y5Y4 395 aa9□□□□□ -0.97
HDAC3-203ENST00000467533 ADAMDEC1O15204 470 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 FADS1O60427 444 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 LILRA1O75019 489 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 BANF1O75531 89 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 RAD51DO75771 328 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 BCAS2O75934 225 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-203ENST00000467533 TACSTD2P09758 323 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 IGHV1-2P23083 117 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 RAC1P63000 192 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 DUSP2Q05923 314 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 CUL3Q13618 768 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 CDKL4Q5MAI5 379 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 SH2D4BQ5SQS7 431 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 FAM180BQ6P0A1 224 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 SLC48A1Q6P1K1 146 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 MARCH3Q86UD3 253 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 RNF10Q8N5U6 811 aaKnown RBP8.99□□□□□ -0.97
HDAC3-203ENST00000467533 TOR1AIP2Q8NFQ8 470 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 MAIP1Q8WWC4 291 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 OSTF1Q92882 214 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 KLHL15Q96M94 604 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 RNF145Q96MT1 663 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 VSTM2LQ96N03 204 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 SUCNR1Q9BXA5 334 aa8.99□□□□□ -0.97
HDAC3-203ENST00000467533 DERL2Q9GZP9 239 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 311.1 ms