RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 SP3Q02447 781 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 GAGE1Q13065 139 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 TFDP1Q14186 410 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ARL6IP1Q15041 203 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 KCNJ8Q15842 424 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 TMEM249Q2WGJ8 235 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ACCSLQ4AC99 568 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ATP13A5Q4VNC0 1218 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 MARC1Q5VT66 337 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 DCAF12L1Q5VU92 463 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 REEP3Q6NUK4 255 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SPESP1Q6UW49 350 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 GDPD4Q6W3E5 623 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CFAP77Q6ZQR2 320 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 C11orf57Q6ZUT1 292 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 TFAP2DQ7Z6R9 452 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 PIGWQ7Z7B1 504 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 TMEM17Q86X19 198 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ZC3H3Q8IXZ2 948 aaKnown RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SLC35F3Q8IY50 421 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 BOD1L2Q8IYS8 172 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ZFP82Q8N141 532 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CERS5Q8N5B7 392 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CCDC71LQ8N9Z2 235 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CNBD1Q8NA66 436 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CADM4Q8NFZ8 388 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 OR5B17Q8NGF7 314 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 FAM110DQ8TAY7 271 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 MARCH1Q8TCQ1 289 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SCARB1Q8WTV0 552 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ASB5Q8WWX0 329 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 HGDQ93099 445 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 EXOSC8Q96B26 276 aaKnown RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SLCO4A1Q96BD0 722 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CMTM5Q96DZ9 223 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 TMEM80Q96HE8 168 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 FAR2Q96K12 515 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 GLT1D1Q96MS3 346 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SERPINB12Q96P63 405 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CCT8L2Q96SF2 557 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CDCA3Q99618 268 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SPAG8Q99932 426 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ABHD6Q9BV23 337 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 WWP1Q9H0M0 922 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 PCBD2Q9H0N5 130 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 OR51M1Q9H341 326 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 EBF3Q9H4W6 596 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 ELOVL6Q9H5J4 265 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 TMEM231Q9H6L2 316 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 WDR76Q9H967 626 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 WDR54Q9H977 334 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 LMAN1LQ9HAT1 526 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 GPR35Q9HC97 309 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 CD209Q9NNX6 404 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 FAM207AQ9NSI2 230 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 PTTG3PQ9NZH4 202 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 MRM2Q9UI43 246 aaKnown RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 MGAT4AQ9UM21 535 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 TMEM184BQ9Y519 407 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-212ENST00000466845 SLCO1B1Q9Y6L6 691 aa5.27□□□□□ -1.57
LRCH3-212ENST00000466845 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 MAGEA13PA6NCF6 341 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 METTL15A6NJ78 407 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 ZNF785A8K8V0 405 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 NEDD8-MDP1E9PL57 170 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 SGK494L7N484 410 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 DLGAP1O14490 977 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 SLC22A2O15244 555 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 ARPC5O15511 151 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 B4GALT5O43286 388 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 SLC28A2O43868 658 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 SSX4O60224 188 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 HS6ST1O60243 411 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 IGHV2-70P01814 119 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 FTH1P02794 183 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 KLK3P07288 261 aaPredicted RBP5.26□□□□□ -1.57
LRCH3-212ENST00000466845 NBEAP1P0C6P0 100 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 SMIM10L1P0DMW3 83 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 ZNF44P15621 663 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 TPSB2P20231 275 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 KCNA3P22001 575 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 OTX1P32242 354 aaPredicted RBP5.26□□□□□ -1.57
LRCH3-212ENST00000466845 RCVRNP35243 200 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 HSPA9P38646 679 aaKnown RBP5.26□□□□□ -1.57
LRCH3-212ENST00000466845 MRPL19P49406 292 aaKnown RBP5.26□□□□□ -1.57
LRCH3-212ENST00000466845 MTHFSP49914 203 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 NDST1P52848 882 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 MAGOHP61326 146 aaKnown RBP5.26□□□□□ -1.57
LRCH3-212ENST00000466845 HERV-K104P63124 156 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 ADARB1P78563 741 aaKnown RBP5.26□□□□□ -1.57
LRCH3-212ENST00000466845 EFNB1P98172 346 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 PITPNAQ00169 270 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 STX4Q12846 297 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 TCF15Q12870 199 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 RUNX2Q13950 521 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 POU6F1Q14863 301 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 TMED2Q15363 201 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 TPSAB1Q15661 275 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 BSXQ3C1V8 233 aa5.26□□□□□ -1.57
LRCH3-212ENST00000466845 ADPRMQ3LIE5 342 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms