RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PRR5P85299 388 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 ZNF844Q08AG5 666 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 PTGR1Q14914 329 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 DUSP5Q16690 384 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 C6orf136Q5SQH8 315 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 APOOLQ6UXV4 268 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 FNDC5Q8NAU1 212 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 SLC16A11Q8NCK7 471 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 PPP1R14CQ8TAE6 165 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 FAM222BQ8WU58 562 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 NRGNQ92686 78 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 FAM120BQ96EK7 910 aaKnown RBP23.38■■□□□ 1.33
U2AF1-206ENST00000464750 OTUB1Q96FW1 271 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-206ENST00000464750 PKNOX2Q96KN3 472 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 ACBD3Q9H3P7 528 aa23.38■■□□□ 1.33
U2AF1-206ENST00000464750 SIRT3Q9NTG7 399 aaPredicted RBP23.38■■□□□ 1.33
U2AF1-206ENST00000464750 NUP214P35658 2090 aaPredicted RBP23.37■■□□□ 1.33
U2AF1-206ENST00000464750 GMFGO60234 142 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 SERPINB4P48594 390 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 C17orf67Q0P5P2 114 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 MLC1Q15049 377 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 TESK1Q15569 626 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 FIGNL1Q6PIW4 674 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 CHMP1BQ7LBR1 199 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 P4HA3Q7Z4N8 544 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 KIF18BQ86Y91 864 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 NUDCD3Q8IVD9 361 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 MEIOBQ8N635 442 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 OR5M1Q8NGP8 315 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 JADE3Q92613 823 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 C16orf58Q96GQ5 468 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 POLDIP3Q9BY77 421 aaKnown RBP23.37■■□□□ 1.33
U2AF1-206ENST00000464750 PARD6BQ9BYG5 372 aa23.37■■□□□ 1.33
U2AF1-206ENST00000464750 ZCCHC3Q9NUD5 404 aaKnown RBP23.37■■□□□ 1.33
U2AF1-206ENST00000464750 IGLV3-32A0A0A0MS00 114 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 A0A1W2PRB8 838 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 OR2M5A3KFT3 312 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 RGS16O15492 202 aaPredicted RBP23.36■■□□□ 1.33
U2AF1-206ENST00000464750 CTIFO43310 598 aaKnown RBP23.36■■□□□ 1.33
U2AF1-206ENST00000464750 ZNF500O60304 480 aaPredicted RBP23.36■■□□□ 1.33
U2AF1-206ENST00000464750 OXSR1O95747 527 aaPredicted RBP23.36■■□□□ 1.33
U2AF1-206ENST00000464750 TGM6O95932 706 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 ALOX5P09917 674 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 LAMP1P11279 417 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 PRIM2P49643 509 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 SORDQ00796 357 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.36■■□□□ 1.33
U2AF1-206ENST00000464750 IL23RQ5VWK5 629 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 ZCCHC12Q6PEW1 402 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 LUZP2Q86TE4 346 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 COX18Q8N8Q8 333 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 GOT1L1Q8NHS2 421 aaPredicted RBP23.36■■□□□ 1.33
U2AF1-206ENST00000464750 TUBGCP3Q96CW5 907 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 PIGQQ9BRB3 760 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 YIPF4Q9BSR8 244 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 ZNF337Q9Y3M9 751 aa23.36■■□□□ 1.33
U2AF1-206ENST00000464750 TUBAL3A6NHL2 446 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 A6NNC1 897 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 ALG1L2C9J202 215 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 H3BML4 177 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 SEC14L5O43304 696 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 LYPLA1O75608 230 aaPredicted RBP23.35■■□□□ 1.33
U2AF1-206ENST00000464750 KCNK2O95069 426 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 HSPA4LO95757 839 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 CPA2P48052 419 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 EXOSC6Q5RKV6 272 aaKnown RBP23.35■■□□□ 1.33
U2AF1-206ENST00000464750 CPTPQ5TA50 214 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 ZAR1Q86SH2 424 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 FAM110BQ8TC76 370 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 RBM24Q9BX46 236 aaKnown RBP23.35■■□□□ 1.33
U2AF1-206ENST00000464750 CLEC4MQ9H2X3 399 aaPredicted RBP23.35■■□□□ 1.33
U2AF1-206ENST00000464750 RASSF1Q9NS23 344 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 ATAD3AQ9NVI7 634 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 SNX8Q9Y5X2 465 aa23.35■■□□□ 1.33
U2AF1-206ENST00000464750 WDR91A4D1P6 747 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 SLC22A20A6NK97 555 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 H0YC42 278 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 LINC01387J3KSC0 135 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 NGFRP08138 427 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 DNAJA1P31689 397 aaKnown RBP23.34■■□□□ 1.33
U2AF1-206ENST00000464750 TPD52P55327 224 aaPredicted RBP23.34■■□□□ 1.33
U2AF1-206ENST00000464750 CLDN15P56746 228 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 LASP1Q14847 261 aaKnown RBP23.34■■□□□ 1.33
U2AF1-206ENST00000464750 GLYR1Q49A26 553 aaPredicted RBP23.34■■□□□ 1.33
U2AF1-206ENST00000464750 KRTCAP2Q8N6L1 136 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 GATSQ8NAP1 163 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 OR4C3Q8NH37 302 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 OR5P2Q8WZ92 322 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 SMPDL3BQ92485 455 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 CHMP6Q96FZ7 201 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 PIGMQ9H3S5 423 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 GALNT8Q9NY28 637 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 PACSIN3Q9UKS6 424 aa23.34■■□□□ 1.33
U2AF1-206ENST00000464750 HIVEP1P15822 2718 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 HRNRQ86YZ3 2850 aaPredicted RBP23.33■■□□□ 1.33
U2AF1-206ENST00000464750 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 A0A1W2PNV4 684 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 FAM221AA4D161 298 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 SHISA8B8ZZ34 492 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 NDUFB5O43674 189 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms