RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 MEPEQ9NQ76 525 aaPredicted RBP3.14□□□□□ -1.91
CLK1-208ENST00000464454 FARSBQ9NSD9 589 aaKnown RBP3.14□□□□□ -1.91
CLK1-208ENST00000464454 RBM28Q9NW13 759 aaKnown RBP3.14□□□□□ -1.91
CLK1-208ENST00000464454 TMOD2Q9NZR1 351 aa3.14□□□□□ -1.91
CLK1-208ENST00000464454 LAMP5Q9UJQ1 280 aa3.14□□□□□ -1.91
CLK1-208ENST00000464454 B9D1Q9UPM9 204 aa3.14□□□□□ -1.91
CLK1-208ENST00000464454 CLDN5O00501 218 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 SLC17A2O00624 439 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 DUX1O43812 170 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 TRIM3O75382 744 aaPredicted RBP3.13□□□□□ -1.91
CLK1-208ENST00000464454 STX11O75558 287 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 CHRNA1P02708 482 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 ASNSP08243 561 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 TSPY4P0CV99 314 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 TSPY10P0CW01 314 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 HSPA5P11021 654 aaKnown RBP3.13□□□□□ -1.91
CLK1-208ENST00000464454 UMPSP11172 480 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 DLSTP36957 453 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 NTHL1P78549 312 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 LINC01620Q4KN68 170 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 ATAD3CQ5T2N8 411 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 SULT1C3Q6IMI6 304 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 LANCL3Q6ZV70 420 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 CYS1Q717R9 158 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 HSD11B1LQ7Z5J1 315 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 IFNEQ86WN2 208 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 NAXDQ8IW45 347 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 BPIFB2Q8N4F0 458 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 ZSCAN4Q8NAM6 433 aaPredicted RBP3.13□□□□□ -1.91
CLK1-208ENST00000464454 DHTKD1Q96HY7 919 aaPredicted RBP3.13□□□□□ -1.91
CLK1-208ENST00000464454 AKR1E2Q96JD6 320 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 OR5M11Q96RB7 305 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 ELOVL4Q9GZR5 314 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.13□□□□□ -1.91
CLK1-208ENST00000464454 UTP6Q9NYH9 597 aaKnown RBP3.13□□□□□ -1.91
CLK1-208ENST00000464454 EHFQ9NZC4 300 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 RSPH14Q9UHP6 348 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 ZNF107Q9UII5 783 aaPredicted RBP3.13□□□□□ -1.91
CLK1-208ENST00000464454 CRLS1Q9UJA2 301 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 BLOC1S6Q9UL45 172 aa3.13□□□□□ -1.91
CLK1-208ENST00000464454 ZSCAN5BA6NJL1 495 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 FAM74A7A6NL05 159 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 FAM220BPB1ANY3 271 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 ANGPT2O15123 496 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 GPAA1O43292 621 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 SLC2A10O95528 541 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 IGKV3-15P01624 115 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 PCCBP05166 539 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 KRT8P05787 483 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 XRCC1P18887 633 aaPredicted RBP3.12□□□□□ -1.91
CLK1-208ENST00000464454 NOVA1P51513 510 aaKnown RBP3.12□□□□□ -1.91
CLK1-208ENST00000464454 BDH1Q02338 343 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 TPD52L1Q16890 204 aaPredicted RBP3.12□□□□□ -1.91
CLK1-208ENST00000464454 FAM74A3Q4VXF1 159 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 TEX44Q53QW1 395 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 MARC1Q5VT66 337 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 NCR3LG1Q68D85 454 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 VITQ6UXI7 678 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 C2orf66Q6UXQ4 117 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 ANKRD37Q7Z713 158 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 HSCBQ8IWL3 235 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 FBXL16Q8N461 479 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 THRSPQ92748 146 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 C18orf25Q96B23 403 aaPredicted RBP3.12□□□□□ -1.91
CLK1-208ENST00000464454 DTNBP1Q96EV8 351 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 SDSLQ96GA7 329 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 RANBP9Q96S59 729 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 CCT8L2Q96SF2 557 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 TMEM121Q9BTD3 319 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 POLR3FQ9H1D9 316 aaPredicted RBP3.12□□□□□ -1.91
CLK1-208ENST00000464454 DPM3Q9P2X0 92 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 CYTH4Q9UIA0 394 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 NAALAD2Q9Y3Q0 740 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 SPACA6W5XKT8 324 aa3.12□□□□□ -1.91
CLK1-208ENST00000464454 SF3B1O75533 1304 aaKnown RBP eCLIP3.12□□□□□ -1.91
CLK1-208ENST00000464454 PPIAL4CA0A0B4J2A2 164 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 IGKV6D-41A0A0C4DH26 115 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 PHOX2AO14813 284 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 THY1P04216 161 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 HBQ1P09105 142 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 SLC35E2P0CK97 266 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 PPIAL4GP0DN37 164 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 EPB41P11171 864 aaKnown RBP3.11□□□□□ -1.91
CLK1-208ENST00000464454 SOX6P35712 828 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 RPL4P36578 427 aaKnown RBP3.11□□□□□ -1.91
CLK1-208ENST00000464454 XCR1P46094 333 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 GNPDA1P46926 289 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 ACADVLP49748 655 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 SLC25A1P53007 311 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 ELP6Q0PNE2 266 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 KCNJ11Q14654 390 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 TAF7Q15545 349 aaPredicted RBP3.11□□□□□ -1.91
CLK1-208ENST00000464454 TATDN3Q17R31 274 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 CCDC57Q2TAC2 916 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 ZNF57Q68EA5 555 aaPredicted RBP3.11□□□□□ -1.91
CLK1-208ENST00000464454 OR8G2PQ6IF36 304 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 GRAMD2AQ8IUY3 354 aa3.11□□□□□ -1.91
CLK1-208ENST00000464454 MCOLN2Q8IZK6 566 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms