RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DEFB123Q8N688 67 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 GGHQ92820 318 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 RBM18Q96H35 190 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 MCHR1Q99705 422 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 PRR14Q9BWN1 585 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 ALOXE3Q9BYJ1 711 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 SEMA4GQ9NTN9 838 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 KLHL3Q9UH77 587 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 NUP210LQ5VU65 1888 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 H3BN98 237 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 TGFBR3LH3BV60 316 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 KIAA0513O60268 411 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 TP53P04637 393 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 S1PR1P21453 382 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 NCS1P62166 190 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 C12orf73Q69YU5 71 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 PLEKHM3Q6ZWE6 761 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 GNPDA2Q8TDQ7 276 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 RIT1Q92963 219 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 ITFG2Q969R8 447 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 LMF2Q9BU23 707 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 CLN6Q9NWW5 311 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 SELENONQ9NZV5 590 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 PMF1-BGLAPU3KQ54 211 aa20.21■□□□□ 0.83
PDLIM2-216ENST00000464275 UNC13CQ8NB66 2214 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 A0A087WUU8 490 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 CCDC163A0A0D9SF12 145 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 ISPDA4D126 451 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 SAGE2PA6NJ88 616 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 TAF4O00268 1085 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 DUX1O43812 170 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 AIREO43918 545 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 OR5F1O95221 314 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 SOX14O95416 240 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 LCKP06239 509 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 GLB1P16278 677 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 HOXA6P31267 233 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 TRHRP34981 398 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 GPR3P46089 330 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 SYT16Q17RD7 645 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 PLXDC1Q8IUK5 500 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 SLC35F3Q8IY50 421 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 KBTBD8Q8NFY9 601 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 DGAT2Q96PD7 388 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 DCSTAMPQ9H295 470 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 C11orf16Q9NQ32 467 aa20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 CNOT2Q9NZN8 540 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-216ENST00000464275 ADAMTS20P59510 1910 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 BMP4P12644 408 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 PPP5CP53041 499 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 HSD17B7P56937 341 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 SNRPGP62308 76 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNHIT3Q15649 155 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 TIGD6Q17RP2 521 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 AMER2Q8N7J2 671 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 ZBTB8BQ8NAP8 495 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 POLR2J2Q9GZM3 115 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 DSN1Q9H410 356 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 FOLH1BQ9HBA9 442 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 ENAMQ9NRM1 1142 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 PI4KAP42356 2102 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 GXYLT2A0PJZ3 443 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 EFCAB10A6NFE3 127 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 M0R129 80 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 BRINP1O60477 761 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 IGFBP1P08833 259 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 LSM3P62310 102 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 HSD11B2P80365 405 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 CASP12Q6UXS9 341 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 SLC46A3Q7Z3Q1 461 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 TOR1AIP2Q8NFQ8 470 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 OR51Q1Q8NH59 317 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 MCFD2Q8NI22 146 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 FBXO34Q9NWN3 711 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 CCDC59Q9P031 241 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 SLC6A14Q9UN76 642 aa20.19■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNF749O43361 778 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 RPLP0P05388 317 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 GUSBP08236 651 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 GIMD1P0DJR0 217 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 NID1P14543 1247 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 ARL4DP49703 201 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 NUDT6P53370 316 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 BTG2P78543 158 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 GPLD1P80108 840 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 MLLT1Q03111 559 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 BIKQ13323 160 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 ERV3-1Q14264 604 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 MAPK14Q16539 360 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 DECR1Q16698 335 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNF404Q494X3 552 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 FIGNL1Q6PIW4 674 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNF730Q6ZMV8 503 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 RRM2BQ7LG56 351 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNF367Q7RTV3 350 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 RANBP3LQ86VV4 465 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 STX19Q8N4C7 294 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 SLC41A3Q96GZ6 507 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNF578Q96N58 590 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 ELF4Q99607 663 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms