RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 IGHV4-30-2A0A087WSY4 118 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 A0A096LPK6 155 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 FAM234BA2RU67 622 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 NDUFB5O43674 189 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 OTCP00480 354 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 IL3P08700 152 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 PABPC4LP0CB38 370 aaKnown RBP12.9□□□□□ -0.34
SMC1A-204ENST00000463684 TYK2P29597 1187 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 AGTR1P30556 359 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 THBS2P35442 1172 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 RFX3P48380 749 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 NUDT6P53370 316 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 HEPACAMQ14CZ8 416 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
SMC1A-204ENST00000463684 TAB1Q15750 504 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 TMEM44Q2T9K0 475 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 TMEM201Q5SNT2 666 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 SFRP5Q5T4F7 317 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 MFSD12Q6NUT3 480 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 CLEC2AQ6UVW9 174 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 GALNT10Q86SR1 603 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 CREG2Q8IUH2 290 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 ZNF619Q8N2I2 560 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 KBTBD8Q8NFY9 601 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 REXO5Q96IC2 774 aaKnown RBP12.9□□□□□ -0.34
SMC1A-204ENST00000463684 ADAD1Q96M93 576 aaKnown RBP12.9□□□□□ -0.34
SMC1A-204ENST00000463684 NSUN5Q96P11 429 aaKnown RBP12.9□□□□□ -0.34
SMC1A-204ENST00000463684 BBS4Q96RK4 519 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 TRIM2Q9C040 744 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 GRIP2Q9C0E4 1043 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 DPH5Q9H2P9 285 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 Q9N2J8 555 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 SLC35C2Q9NQQ7 365 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 CISD1Q9NZ45 108 aaKnown RBP12.9□□□□□ -0.34
SMC1A-204ENST00000463684 MCM8Q9UJA3 840 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 NFU1Q9UMS0 254 aa12.9□□□□□ -0.34
SMC1A-204ENST00000463684 ABCA1O95477 2261 aa12.9□□□□□ -0.35
SMC1A-204ENST00000463684 A0A087WZY1 265 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 GNG14A0A1W2PPG7 69 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 STX16-NPEPL1H3BU86 382 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 STX16O14662 325 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 ADAMDEC1O15204 470 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 SMIM24O75264 130 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 GCM2O75603 506 aaPredicted RBP12.89□□□□□ -0.35
SMC1A-204ENST00000463684 IL33O95760 270 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 ANGPTL1O95841 491 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 CD8AP01732 235 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 OPN1LWP04000 364 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 RBP1P09455 135 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 CTAGE8P0CG41 777 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 ZNF17P17021 662 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 ME2P23368 584 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 PAFAH1B1P43034 410 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 CASP9P55211 416 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 BSPH1Q075Z2 132 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 LOXL1Q08397 574 aaPredicted RBP12.89□□□□□ -0.35
SMC1A-204ENST00000463684 TSC22D1Q15714 1073 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 AGAP6Q5VW22 663 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 HBMQ6B0K9 141 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 CYB5R2Q6BCY4 276 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 ESPNLQ6ZVH7 1005 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.89□□□□□ -0.35
SMC1A-204ENST00000463684 CTAGE4Q8IX94 777 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 CEP112Q8N8E3 955 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 OR10H5Q8NGA6 315 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 OR2V1Q8NHB1 315 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 PIWIL2Q8TC59 973 aaKnown RBP12.89□□□□□ -0.35
SMC1A-204ENST00000463684 KISS1RQ969F8 398 aaPredicted RBP12.89□□□□□ -0.35
SMC1A-204ENST00000463684 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
SMC1A-204ENST00000463684 GPR78Q96P69 363 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 VPS11Q9H270 941 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 HHATLQ9HCP6 504 aa12.89□□□□□ -0.35
SMC1A-204ENST00000463684 IGLV3-32A0A0A0MS00 114 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 TNFSF11O14788 317 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 ZSCAN12O43309 604 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 UTS2O95399 124 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 CARD18P57730 90 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 RAC1P63000 192 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 PRR5P85299 388 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 VLDLRP98155 873 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 TECRLQ5HYJ1 363 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 DTX2Q86UW9 622 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 CCDC25Q86WR0 208 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 GABRG1Q8N1C3 465 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 GTPBP8Q8N3Z3 284 aaPredicted RBP12.88□□□□□ -0.35
SMC1A-204ENST00000463684 OSTF1Q92882 214 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 ADGRG7Q96K78 797 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 HBEGFQ99075 208 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 ERP44Q9BS26 406 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 SHCBP1LQ9BZQ2 653 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 C3orf14Q9HBI5 128 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 B3GALT5Q9Y2C3 310 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 CR1P17927 2039 aa12.88□□□□□ -0.35
SMC1A-204ENST00000463684 A0A087WV62 115 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 DPRXA6NFQ7 191 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 UBFD1O14562 309 aaKnown RBP12.87□□□□□ -0.35
SMC1A-204ENST00000463684 PCDH7O60245 1069 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 ADAP00813 363 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 HSD3B1P14060 373 aa12.87□□□□□ -0.35
SMC1A-204ENST00000463684 SLC25A16P16260 332 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms