RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SLC10A1Q14973 349 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 TOMM20Q15388 145 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 GTDC1Q4AE62 458 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 GKAP1Q5VSY0 366 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-204ENST00000463487 MTDHQ86UE4 582 aaKnown RBP18.09■□□□□ 0.49
COL9A3-204ENST00000463487 PLCZ1Q86YW0 608 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 SIAH3Q8IW03 269 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 RP9Q8TA86 221 aaKnown RBP18.09■□□□□ 0.49
COL9A3-204ENST00000463487 ROPN1LQ96C74 230 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 AURKBQ96GD4 344 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-204ENST00000463487 TRNT1Q96Q11 434 aaKnown RBP18.09■□□□□ 0.49
COL9A3-204ENST00000463487 ZNF350Q9GZX5 532 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 TSPAN10Q9H1Z9 355 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-204ENST00000463487 PTGES2Q9H7Z7 377 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 ZDHHC11Q9H8X9 412 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 CACYBPQ9HB71 228 aaKnown RBP18.09■□□□□ 0.49
COL9A3-204ENST00000463487 ARMCX1Q9P291 453 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 WDR45Q9Y484 360 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 KCNE3Q9Y6H6 103 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 EML6Q6ZMW3 1958 aa18.09■□□□□ 0.49
COL9A3-204ENST00000463487 SHOX2O60902 331 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-204ENST00000463487 ATP12AP54707 1039 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 RGNQ15493 299 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 GPR68Q15743 365 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 IGFBP7Q16270 282 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.08■□□□□ 0.487e-7■□□□□ 8.4
COL9A3-204ENST00000463487 RNFT1Q5M7Z0 435 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 COX20Q5RI15 118 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 ARHGAP11AQ6P4F7 1023 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 MTERF4Q7Z6M4 381 aaKnown RBP18.08■□□□□ 0.48
COL9A3-204ENST00000463487 PIGWQ7Z7B1 504 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 SNX32Q86XE0 403 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 OR4K17Q8NGC6 315 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 OR4C3Q8NH37 302 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 PMM1Q92871 262 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 SH3GL1Q99961 368 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 LDAHQ9H6V9 325 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 EXO5Q9H790 373 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 GID8Q9NWU2 228 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 VAPAQ9P0L0 249 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 GMEB1Q9Y692 573 aa18.08■□□□□ 0.48
COL9A3-204ENST00000463487 NINQ8N4C6 2090 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 LOC100653049A0A140TA62 436 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 MRASO14807 208 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 TRAPPC6AO75865 159 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 KRT34O76011 436 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 CBX6O95503 412 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 ANGPTL1O95841 491 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 ETFAP13804 333 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 HOXB9P17482 250 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-204ENST00000463487 CRISP3P54108 245 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 CASP6P55212 293 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 GANABQ14697 944 aaKnown RBP18.07■□□□□ 0.48
COL9A3-204ENST00000463487 TRMT5Q32P41 509 aaKnown RBP18.07■□□□□ 0.48
COL9A3-204ENST00000463487 CMPK2Q5EBM0 449 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 MARCH3Q86UD3 253 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 ZNF619Q8N2I2 560 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 ZNF614Q8N883 585 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 NTNG2Q96CW9 530 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 CMTM5Q96DZ9 223 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 GNRHR2Q96P88 292 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 CCT8L2Q96SF2 557 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 DEFB127Q9H1M4 99 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 ACKR4Q9NPB9 350 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 FBXO34Q9NWN3 711 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 SLC25A37Q9NYZ2 338 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 FLRT3Q9NZU0 649 aa18.07■□□□□ 0.48
COL9A3-204ENST00000463487 ZNF462Q96JM2 2506 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 SHANK1Q9Y566 2161 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 C2orf72A6NCS6 295 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 KIAA0513O60268 411 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 HCN1O60741 890 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 H6PDO95479 791 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 MSX1P28360 303 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 GAS1P54826 345 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 ZNF630Q2M218 657 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-204ENST00000463487 FNDC7Q5VTL7 733 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 REP15Q6BDI9 236 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 DLEU7Q6UYE1 221 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 LRRC74BQ6ZQY2 392 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 ZAR1Q86SH2 424 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 ANKS4BQ8N8V4 417 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 LRRC37BQ96QE4 947 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 CGREF1Q99674 301 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 THUMPD3Q9BV44 507 aaKnown RBP18.06■□□□□ 0.48
COL9A3-204ENST00000463487 SLAMF8Q9P0V8 285 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 DKKL1Q9UK85 242 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 DTNAQ9Y4J8 743 aa18.06■□□□□ 0.48
COL9A3-204ENST00000463487 TRBV5-3A0A0A0MS03 114 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 TRGV5A0A0B4J1U4 118 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 C5orf58C9J3I9 102 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 FAM47E-STBD1D6RA91 191 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 GTPBP1O00178 669 aaKnown RBP18.05■□□□□ 0.48
COL9A3-204ENST00000463487 SUSD5O60279 629 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 IGHG3P01860 377 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 RFPL3SP0C7P2 107 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 ABOP16442 354 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 MVDP53602 400 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 KLHL26Q53HC5 615 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 GCNT6Q5T4J0 391 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms