RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ATP5A1P25705 553 aaKnown RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CD1CP29017 333 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 TSFMP43897 325 aaKnown RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 TRPC1P48995 793 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 SLC7A2P52569 658 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 GFERP55789 205 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 VSX2P58304 361 aaPredicted RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 BTN3A2P78410 334 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 MC1RQ01726 317 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 KLC1Q07866 573 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 SLAMF1Q13291 335 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 DNASE1L3Q13609 305 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CEACAM7Q14002 265 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 HEPACAMQ14CZ8 416 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CCDC6Q16204 474 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 PIGGQ5H8A4 983 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 SAMD4BQ5PRF9 694 aaKnown RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 WASHC2DQ5SRD0 308 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 MANEAQ5SRI9 462 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 C6orf10Q5SRN2 563 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ANXA8L1Q5VT79 327 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 C1orf146Q5VVC0 180 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 FAM90A2PQ658T7 463 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ANKRD26P1Q6NSI1 321 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 NANOGP8Q6NSW7 305 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ZNF793Q6ZN11 406 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ABHD13Q7L211 337 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CAMKMTQ7Z624 323 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ZCCHC7Q8N3Z6 543 aaKnown RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 DNAJC22Q8N4W6 341 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 EID2Q8N6I1 236 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ACOT4Q8N9L9 421 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 OR8K5Q8NH50 307 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 UTP15Q8TED0 518 aaKnown RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 PPCDCQ96CD2 204 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 MTERF3Q96E29 417 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 RITA1Q96K30 269 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CD180Q99467 661 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CGREF1Q99674 301 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CCDC3Q9BQI4 270 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 SLC39A3Q9BRY0 314 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 NLNQ9BYT8 704 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ROGDIQ9GZN7 287 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 DENND2DQ9H6A0 471 aaPredicted RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 COPS7BQ9H9Q2 264 aaPredicted RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 NANOGQ9H9S0 305 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 FAM60AQ9NP50 221 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ATAD3AQ9NVI7 634 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 FAM120CQ9NX05 1096 aaKnown RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CMTM6Q9NX76 183 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 RAB23Q9ULC3 237 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 BTBD3Q9Y2F9 522 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 L3MBTL1Q9Y468 752 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 PCDHGA5Q9Y5G8 931 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 SPEGQ15772 3267 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 SPTBN2O15020 2390 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 A0A096LPI6 279 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 C15orf38-AP3S2A0A0A6YYH1 394 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 IGHV5-51A0A0C4DH38 117 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 LY6G6EA0A0G2JKS1 128 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 EME2A4GXA9 379 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 PRORSD1PA6NEY8 169 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 TXNDC9O14530 226 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 RFXANKO14593 260 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 DNPH1O43598 174 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 HCRTR1O43613 425 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 MGRN1O60291 552 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 SRPX2O60687 465 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 TBX19O60806 448 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 SCN2BO60939 215 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ZBTB11O95625 1053 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ANP32DO95626 131 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CPSF4O95639 269 aaKnown RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 MBPP02686 304 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 C9P02748 559 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 TMIGD3P0DMS9 266 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 SMIM10L1P0DMW3 83 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 DDX5P17844 614 aaKnown RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ALOX12P18054 663 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 TCN1P20061 433 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ZNF10P21506 573 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CERS1P27544 350 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 GALNSP34059 522 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 HNRNPFP52597 415 aaKnown RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ATXN3P54252 364 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CFHR1Q03591 330 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 LRRC74AQ0VAA2 488 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 PDE7AQ13946 482 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 KPNB1Q14974 876 aaKnown RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 DEFB110Q30KQ9 67 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 RUNDC3AQ59EK9 446 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 LRIF1Q5T3J3 769 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CCDC144NLQ6NUI1 221 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 GUSBP11Q6P575 273 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 TLDC1Q6P9B6 456 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CYB5D1Q6P9G0 228 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 WDR74Q6RFH5 385 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ZNF782Q6ZMW2 699 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 DGLUCYQ7Z3D6 616 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms