RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ZNF845Q96IR2 970 aaPredicted RBP16.09■□□□□ 0.17
SSB-206ENST00000461708 FCRL1Q96LA6 429 aa16.09■□□□□ 0.17
SSB-206ENST00000461708 WFIKKN1Q96NZ8 548 aa16.09■□□□□ 0.17
SSB-206ENST00000461708 CCT7Q99832 543 aa16.09■□□□□ 0.17
SSB-206ENST00000461708 PINK1Q9BXM7 581 aa16.09■□□□□ 0.17
SSB-206ENST00000461708 TBL1XR1Q9BZK7 514 aa16.09■□□□□ 0.17
SSB-206ENST00000461708 C1orf109Q9NX04 203 aa16.09■□□□□ 0.17
SSB-206ENST00000461708 JMJD1CQ15652 2540 aa16.08■□□□□ 0.17
SSB-206ENST00000461708 A0A087WZY1 265 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 DEFB108AA8MXU0 73 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 C16orf97H3BN30 126 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 SEC22BO75396 215 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 NKX2-2O95096 273 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 ANGPTL1O95841 491 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 PRPS2P11908 318 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 CPA3P15088 417 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 ZNF17P17021 662 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 LCN1P31025 176 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 GABRA3P34903 492 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 CLDN20P56880 219 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 STX5Q13190 355 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 CDRT4Q8N9R6 151 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 FNDC9Q8TBE3 224 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 CAVIN3Q969G5 261 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 PIGTQ969N2 578 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 GFM2Q969S9 779 aaKnown RBP16.08■□□□□ 0.16
SSB-206ENST00000461708 C18orf12Q96KH6 178 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 EGLN2Q96KS0 407 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 TRMOQ9BU70 441 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 TNFRSF12AQ9NP84 129 aa16.08■□□□□ 0.16
SSB-206ENST00000461708 C7orf72A4D263 438 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 ALG1L2C9J202 215 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 H0YC42 278 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 PDPK1O15530 556 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 ARHGEF9O43307 516 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 RGS14O43566 566 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 NEFHP12036 1026 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 FRKP42685 505 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 TPD52P55327 224 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 NKX6-1P78426 367 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 PON3Q15166 354 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 GRAMD1BQ3KR37 738 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 LIPMQ5VYY2 423 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 APOOLQ6UXV4 268 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 FAM214BQ7L5A3 538 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 ZNF551Q7Z340 670 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 ZFP28Q8NHY6 868 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 ZBED6CLQ96FA7 236 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 MARK4Q96L34 752 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 FAM111AQ96PZ2 611 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 MED18Q9BUE0 208 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 OPN3Q9H1Y3 402 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 GSX1Q9H4S2 264 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 LRTM1Q9HBL6 345 aa16.07■□□□□ 0.16
SSB-206ENST00000461708 ACSS1Q9NUB1 689 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 PAQR5Q9NXK6 330 aaPredicted RBP16.07■□□□□ 0.16
SSB-206ENST00000461708 DSCAMO60469 2012 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 GXYLT2A0PJZ3 443 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 H3BML4 177 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 SIAH2O43255 324 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 SEC14L5O43304 696 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 IGKV1D-16P01601 117 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 POU2F1P14859 743 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 FPR1P21462 350 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 TBXA2RP21731 343 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 CCKARP32238 428 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 PDE7AQ13946 482 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.06■□□□□ 0.16
SSB-206ENST00000461708 ZCCHC12Q6PEW1 402 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 GGNQ86UU5 652 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 GTPBP8Q8N3Z3 284 aaPredicted RBP16.06■□□□□ 0.16
SSB-206ENST00000461708 FAM110BQ8TC76 370 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 GPR151Q8TDV0 419 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 ACTRT2Q8TDY3 377 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 MTERF3Q96E29 417 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 REEP4Q9H6H4 257 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 KLHL28Q9NXS3 571 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 MID2Q9UJV3 735 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 TMED5Q9Y3A6 229 aa16.06■□□□□ 0.16
SSB-206ENST00000461708 COPEO14579 308 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 AZIN1O14977 448 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 HSPA4LO95757 839 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 PPP3CBP16298 524 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 IL11P20809 199 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 GPC1P35052 558 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 RFX3P48380 749 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 SIRPAP78324 504 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 HSPB3Q12988 150 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 CLEC6AQ6EIG7 209 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 PRSS57Q6UWY2 283 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 Q6ZSR9 355 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 MISPQ8IVT2 679 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 WDR75Q8IWA0 830 aaKnown RBP16.05■□□□□ 0.16
SSB-206ENST00000461708 ZNF610Q8N9Z0 462 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 OR5M1Q8NGP8 315 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 OR6Y1Q8NGX8 325 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 PIK3R3Q92569 461 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 PPCDCQ96CD2 204 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 MS4A4EQ96PG1 132 aa16.05■□□□□ 0.16
SSB-206ENST00000461708 RHOXF2Q9BQY4 288 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms