RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 MED11Q9P086 117 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 FAF1Q9UNN5 650 aaPredicted RBP20.87■□□□□ 0.93
PTPN4-208ENST00000460289 ANGPTL1O95841 491 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 NGFRP08138 427 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 KRT16P08779 473 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 LASP1Q14847 261 aaKnown RBP20.86■□□□□ 0.93
PTPN4-208ENST00000460289 GRAMD1BQ3KR37 738 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 EXOSC6Q5RKV6 272 aaKnown RBP20.86■□□□□ 0.93
PTPN4-208ENST00000460289 TNIP2Q8NFZ5 429 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 SFXN5Q8TD22 340 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 CHMP6Q96FZ7 201 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 TREX2Q9BQ50 279 aaPredicted RBP20.86■□□□□ 0.93
PTPN4-208ENST00000460289 BTBD2Q9BX70 525 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 ACTRT3Q9BYD9 372 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 PIGUQ9H490 435 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 CXorf36Q9H7Y0 433 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 ZNF629Q9UEG4 869 aaPredicted RBP20.86■□□□□ 0.93
PTPN4-208ENST00000460289 RPH3AQ9Y2J0 694 aaPredicted RBP20.86■□□□□ 0.93
PTPN4-208ENST00000460289 PKDREJQ9NTG1 2253 aa20.86■□□□□ 0.93
PTPN4-208ENST00000460289 H0Y3Z8 333 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 DVL2O14641 736 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 HPGDP15428 266 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 HK1P19367 917 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 TBXA2RP21731 343 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 POU6F2P78424 691 aaPredicted RBP20.85■□□□□ 0.93
PTPN4-208ENST00000460289 TP53BP2Q13625 1128 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 CASP8Q14790 479 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 BCL2A1Q16548 175 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 CDC73Q6P1J9 531 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 FIGNL1Q6PIW4 674 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 LIX1LQ8IVB5 337 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 VPS37AQ8NEZ2 397 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 OR8J2Q8NGG1 315 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 ADAMTS15Q8TE58 950 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 RTN4RQ9BZR6 473 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 TRIM8Q9BZR9 551 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 UBQLN4Q9NRR5 601 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 PCDHGB4Q9UN71 923 aa20.85■□□□□ 0.93
PTPN4-208ENST00000460289 IGLV3-32A0A0A0MS00 114 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 MBD3L4A6NDZ8 208 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-208ENST00000460289 MBD3L3A6NE82 208 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-208ENST00000460289 MBD3L5A6NJ08 208 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-208ENST00000460289 TRPC5OSA6NMA1 111 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 C17orf51A8MQB3 221 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 B4DXG7 233 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 ALG1L2C9J202 215 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 SLCO1B7G3V0H7 640 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 LINC01387J3KSC0 135 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 NDUFB5O43674 189 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 SNNO75324 88 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-208ENST00000460289 IGFBP2P18065 325 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 SSTR2P30874 369 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 STARP49675 285 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 LHX2P50458 406 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 HBA1P69905 142 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 SRYQ05066 204 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 GLYR1Q49A26 553 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-208ENST00000460289 APOOLQ6UXV4 268 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 GALNT10Q86SR1 603 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 OR4C3Q8NH37 302 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 GOT1L1Q8NHS2 421 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-208ENST00000460289 MBD3L2Q8NHZ7 208 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-208ENST00000460289 MANSC1Q9H8J5 431 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 SLC24A3Q9HC58 644 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 NPDC1Q9NQX5 325 aaPredicted RBP20.84■□□□□ 0.93
PTPN4-208ENST00000460289 ADGRG4Q8IZF6 3080 aa20.84■□□□□ 0.93
PTPN4-208ENST00000460289 KDM4EB2RXH2 506 aaPredicted RBP20.83■□□□□ 0.93
PTPN4-208ENST00000460289 RNASET2O00584 256 aaKnown RBP20.83■□□□□ 0.93
PTPN4-208ENST00000460289 HDAC3O15379 428 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 OXSR1O95747 527 aaPredicted RBP20.83■□□□□ 0.93
PTPN4-208ENST00000460289 PEPDP12955 493 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 CLNS1AP54105 237 aaKnown RBP20.83■□□□□ 0.93
PTPN4-208ENST00000460289 ANXA8L1Q5VT79 327 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 OR4F3Q6IEY1 312 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 OGFOD2Q6N063 350 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 ZNF295-AS1Q8N0V1 137 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 CDS1Q92903 461 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 C1GALT1C1Q96EU7 318 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 C14orf79Q96F83 325 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 LRRC46Q96FV0 321 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 OTUB1Q96FW1 271 aaPredicted RBP20.83■□□□□ 0.93
PTPN4-208ENST00000460289 UCN2Q96RP3 112 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 TUBA1CQ9BQE3 449 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 GPATCH2Q9NW75 528 aa20.83■□□□□ 0.93
PTPN4-208ENST00000460289 ARHGAP21Q5T5U3 1957 aa20.83■□□□□ 0.92
PTPN4-208ENST00000460289 SCDO00767 359 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 ZNF708P17019 499 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 BMP5P22003 454 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 TCEA1P23193 301 aaKnown RBP20.82■□□□□ 0.92
PTPN4-208ENST00000460289 WNT3P56703 355 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 CLDN18P56856 261 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 B3GALT5-AS1P59052 145 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 DPY19L1Q2PZI1 675 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 AGBL2Q5U5Z8 902 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 RAET1LQ5VY80 246 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 MISPQ8IVT2 679 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 DMRTC2Q8IXT2 367 aaPredicted RBP20.82■□□□□ 0.92
PTPN4-208ENST00000460289 NAXEQ8NCW5 288 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 TESCQ96BS2 214 aa20.82■□□□□ 0.92
PTPN4-208ENST00000460289 TM9SF2Q99805 663 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms