RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 HRGP04196 525 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 NGFRP08138 427 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 ASMTP46597 345 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 CLDN15P56746 228 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 OCRLQ01968 901 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 GRAMD1BQ3KR37 738 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 GPR151Q8TDV0 419 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 PIK3R3Q92569 461 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 MTERF3Q96E29 417 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 PINK1Q9BXM7 581 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 PLEKHF2Q9H8W4 249 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 L2HGDHQ9H9P8 463 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 NTMQ9P121 344 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 ZNF337Q9Y3M9 751 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 TESMINQ9Y4I5 508 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 PCNX3Q9H6A9 2034 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 FLNAP21333 2647 aaKnown RBP20.53■□□□□ 0.88
PTPN4-207ENST00000460162 AKAP10O43572 662 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 SMNDC1O75940 238 aaKnown RBP eCLIP20.53■□□□□ 0.88
PTPN4-207ENST00000460162 IGKV1D-16P01601 117 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 DDX5P17844 614 aaKnown RBP20.53■□□□□ 0.88
PTPN4-207ENST00000460162 SUCLG1P53597 346 aaKnown RBP20.53■□□□□ 0.88
PTPN4-207ENST00000460162 KEAP1Q14145 624 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 FGFBP1Q14512 234 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 RFTN2Q52LD8 501 aaPredicted RBP20.53■□□□□ 0.88
PTPN4-207ENST00000460162 VWA1Q6PCB0 445 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 METTL25Q8N6Q8 603 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 CNEP1R1Q8N9A8 125 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 NUP43Q8NFH3 380 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 FIG4Q92562 907 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 STARD4Q96DR4 205 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 RNF122Q9H9V4 155 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 NDRG3Q9UGV2 375 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 AP4B1Q9Y6B7 739 aa20.53■□□□□ 0.88
PTPN4-207ENST00000460162 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 ALG1L2C9J202 215 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 NPHS1O60500 1241 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 LINC00032P0C843 101 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 FCGR2AP12318 317 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 ZNF17P17021 662 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 KLK2P20151 261 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 MANFP55145 182 aaKnown RBP20.52■□□□□ 0.88
PTPN4-207ENST00000460162 RPS3AP61247 264 aaKnown RBP20.52■□□□□ 0.88
PTPN4-207ENST00000460162 TMEM44Q2T9K0 475 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 SZRD1Q7Z422 152 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 DDIASQ8IXT1 998 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 BANPQ8N9N5 519 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 OR5M1Q8NGP8 315 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 CLHC1Q8NHS4 586 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 TWIST2Q8WVJ9 160 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 SLC9A6Q92581 669 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 GIMAP5Q96F15 307 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 SH3BP4Q9P0V3 963 aa20.52■□□□□ 0.88
PTPN4-207ENST00000460162 H0YC42 278 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 CASKO14936 926 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 EMC8O43402 210 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 CHRNGP07510 517 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 FGF4P08620 206 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 LCN1P31025 176 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 PRKAG1P54619 331 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 TPD52P55327 224 aaPredicted RBP20.51■□□□□ 0.87
PTPN4-207ENST00000460162 CLDN20P56880 219 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 PON3Q15166 354 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 POU4F3Q15319 338 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTPN4-207ENST00000460162 DEFB113Q30KQ7 82 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 GALNTL6Q49A17 601 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 MFSD12Q6NUT3 480 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 ZCCHC12Q6PEW1 402 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 APOOLQ6UXV4 268 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 R3HCC1LQ7Z5L2 792 aaKnown RBP20.51■□□□□ 0.87
PTPN4-207ENST00000460162 TRABD2AQ86V40 505 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 OR6Y1Q8NGX8 325 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 FNDC9Q8TBE3 224 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 EML4Q9HC35 981 aaKnown RBP20.51■□□□□ 0.87
PTPN4-207ENST00000460162 STOML1Q9UBI4 398 aa20.51■□□□□ 0.87
PTPN4-207ENST00000460162 TMEM114B3SHH9 223 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 OXSR1O95747 527 aaPredicted RBP20.5■□□□□ 0.87
PTPN4-207ENST00000460162 NUDT17P0C025 328 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 ACP2P11117 423 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 MAPK1P28482 360 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 ALDH3A1P30838 453 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 HPCAL1P37235 193 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 RPL3P39023 403 aaKnown RBP20.5■□□□□ 0.87
PTPN4-207ENST00000460162 CD79BP40259 229 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 KIR2DL2P43627 348 aaPredicted RBP20.5■□□□□ 0.87
PTPN4-207ENST00000460162 SIRPAP78324 504 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 MLC1Q15049 377 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 LRIG3Q6UXM1 1119 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 FBXO30Q8TB52 745 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 PGM2Q96G03 612 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 ZNF845Q96IR2 970 aaPredicted RBP20.5■□□□□ 0.87
PTPN4-207ENST00000460162 FAM111AQ96PZ2 611 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 BAIAP2L1Q9UHR4 511 aa20.5■□□□□ 0.87
PTPN4-207ENST00000460162 EIF3LQ9Y262 564 aaKnown RBP20.5■□□□□ 0.87
PTPN4-207ENST00000460162 ACANP16112 2415 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 A0A087WZY1 265 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 TLDC2A0PJX2 215 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 TMEM233B4DJY2 109 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 PIP5K1BO14986 540 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms