RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SEPHS1P49903 392 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 MAP2K6P52564 334 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 CRISP1P54107 249 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 PNLIPRP2P54317 469 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 CTBP2P56545 445 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 RPP38P78345 283 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 CDK5R2Q13319 367 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF267Q14586 743 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 MAD2L1BPQ15013 274 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 FLYWCH1Q4VC44 716 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SLX4IPQ5VYV7 408 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 RBM44Q6ZP01 1051 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 RASSF6Q6ZTQ3 369 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 MBOAT2Q6ZWT7 520 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC29A4Q7RTT9 530 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 CDK20Q8IZL9 346 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF786Q8N393 782 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 FAM71CQ8NEG0 241 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 OR5L2Q8NGL0 311 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 OR6T1Q8NGN1 323 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 RHOXF1Q8NHV9 184 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 C9orf43Q8TAL5 461 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 METTL21AQ8WXB1 218 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 DDA1Q9BW61 102 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 NDEL1Q9GZM8 345 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 DUSP21Q9H596 190 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 NECTIN3Q9NQS3 549 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 METRNQ9UJH8 293 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 U3KQV3 271 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 KNL1Q8NG31 2342 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 MUC3AQ02505 3323 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 RALGAPA1Q6GYQ0 2036 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 LOC102723996A0A087X1L8 192 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 EIF4E2O60573 245 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 PPM1BO75688 479 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SCRG1O75711 98 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 DDAH2O95865 285 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 EPPINO95925 133 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 KLK3P07288 261 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 CT62P0C5K7 136 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 CT45A8P0DMV1 189 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 CT45A9P0DMV2 189 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 PNMTP11086 282 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 ALAS2P22557 587 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 GPR143P51810 404 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 IST1P53990 364 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SRSF5Q13243 272 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 NPTX1Q15818 432 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 OCLNQ16625 522 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 ZBED5Q49AG3 693 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 KLHL26Q53HC5 615 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 CT45A2Q5DJT8 189 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 HLA-DQA1Q5Y7H0 255 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 FAM180BQ6P0A1 224 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 PGBD2Q6P3X8 592 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM205Q6UW68 189 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 C5orf46Q6UWT4 87 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 DEF8Q6ZN54 512 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF836Q6ZNA1 936 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 PLEKHM3Q6ZWE6 761 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 DGLUCYQ7Z3D6 616 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 GALNT10Q86SR1 603 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 GATAD2AQ86YP4 633 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 EGFL6Q8IUX8 553 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC34A3Q8N130 599 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 BMPERQ8N8U9 685 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 AQP11Q8NBQ7 271 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 C16orf52Q8NHV5 167 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC7A13Q8TCU3 470 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC2A12Q8TD20 617 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF721Q8TF20 911 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 MYDGFQ969H8 173 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 LIN37Q96GY3 246 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 OR6C1Q96RD1 312 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 MCHR1Q99705 422 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 YIPF4Q9BSR8 244 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM121BQ9BXQ6 578 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 RIBC2Q9H4K1 309 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SELENONQ9NZV5 590 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SNX5Q9Y5X3 404 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 KCNE3Q9Y6H6 103 aa6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 COL27A1Q8IZC6 1860 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-210ENST00000454859 SPTBN5Q9NRC6 3674 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 DPPA5A6NC42 116 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 EFCAB10A6NFE3 127 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SAGE2PA6NJ88 616 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 PRR33A8MZF0 331 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 C9J4A7 227 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 TGFBR3LH3BV60 316 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CHP2O43745 196 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CLPSP04118 112 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 HMGN1P05114 100 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 TFAP2AP05549 437 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 GNAO1P09471 354 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 RAB40ALP0C0E4 278 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ZGLP1P0C6A0 271 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CLK3P49761 638 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF136P52737 540 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SMSP52788 366 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SUMO3P55854 103 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms