RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 RAB36O95755 333 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 GRPRP30550 384 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 KIR2DL1P43626 348 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 RORCP51449 518 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ILKQ13418 452 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ALG11Q2TAA5 492 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 NIPAL1Q6NVV3 410 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 CCBE1Q6UXH8 406 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 LAX1Q8IWV1 398 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SLC37A2Q8TED4 501 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 AHCYL2Q96HN2 611 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 TGM7Q96PF1 710 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 NELL2Q99435 816 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SLC30A2Q9BRI3 323 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 TMEM74BQ9NUR3 256 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 CALML5Q9NZT1 146 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 TNFRSF10DQ9UBN6 386 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SOCS6O14544 535 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 FGF17O60258 216 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 SOX18P35713 384 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 ACVR1BP36896 505 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 SLC15A1P46059 708 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 IL18Q14116 193 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF362Q5T0B9 420 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-213ENST00000454468 UBE2UQ5VVX9 321 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 FBXO42Q6P3S6 717 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 VN1R4Q7Z5H5 301 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 OR6K6Q8NGW6 343 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 BMFQ96LC9 184 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 TMEM27Q9HBJ8 222 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 PNO1Q9NRX1 252 aaKnown RBP11.19□□□□□ -0.62
SMPD4-213ENST00000454468 SLC17A4Q9Y2C5 497 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 GXYLT2A0PJZ3 443 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 C5orf67F2Z3F1 127 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 J3QLW9 94 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 PLRG1O43660 514 aaKnown RBP11.19□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF19P17023 458 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 AGERQ15109 404 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 SYT14P1Q58G82 188 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 ZMAT1Q5H9K5 638 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 MRPL2Q5T653 305 aaKnown RBP11.19□□□□□ -0.62
SMPD4-213ENST00000454468 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 MFSD9Q8NBP5 474 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 CHPT1Q8WUD6 406 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 UFD1Q92890 307 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 SPACA7Q96KW9 195 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 SLC38A1Q9H2H9 487 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 KIR3DX1Q9H7L2 352 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 FTSJ1Q9UET6 329 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 PHF11Q9UIL8 331 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 PCDHGB6Q9Y5F9 930 aa11.19□□□□□ -0.62
SMPD4-213ENST00000454468 DAPL1A0PJW8 107 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 MAGEB4O15481 346 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 LGI1O95970 557 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 ITPKBP27987 946 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 TNFSF8P32971 234 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 NAA10P41227 235 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 HNRNPFP52597 415 aaKnown RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 NDUFAF6Q330K2 333 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 KLHL22Q53GT1 634 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 IDNKQ5T6J7 187 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 SLC36A4Q6YBV0 504 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 C19orf18Q8NEA5 215 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 PFN4Q8NHR9 129 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 GAL3ST3Q96A11 431 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF582Q96NG8 517 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 GFM1Q96RP9 751 aaKnown RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 CD180Q99467 661 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 CDADC1Q9BWV3 514 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 C2orf74A8MZ97 194 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 KHNYNO15037 678 aaKnown RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 CCNKO75909 580 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 CTSBP07858 339 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 ADRA2AP08913 450 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 C21orf58P58505 322 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 COPZ1P61923 177 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 RPS25P62851 125 aaKnown RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 ODF4Q2M2E3 257 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 TRIQKQ629K1 86 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 SHISA6Q6ZSJ9 500 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 RASGRP3Q8IV61 690 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 CADM3Q8N126 398 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 GNPDA2Q8TDQ7 276 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 MRPL38Q96DV4 380 aaKnown RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 SMURF1Q9HCE7 757 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 KRCC1Q9NPI7 259 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 SATB2Q9UPW6 733 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 A0A1W2PQF6 199 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 LRRN3E7EW58 273 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 RCVRNP35243 200 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 CD79BP40259 229 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 CSTF1Q05048 431 aaKnown RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 Q8N9G6 341 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 OR52I1Q8NGK6 324 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 PMEPA1Q969W9 287 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 KLHDC7BQ96G42 594 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 KCTD7Q96MP8 289 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 LRRN3Q9H3W5 708 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 LYARQ9NX58 379 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms