RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 FNDC8Q8TC99 324 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 WBP1Q96G27 269 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 LITAFQ99732 161 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 FEM1AQ9BSK4 669 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 LRRN3Q9H3W5 708 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 POLD4Q9HCU8 107 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 SEC14L4Q9UDX3 406 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 CACNG5Q9UF02 275 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 MLXQ9UH92 298 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 ZNF639Q9UID6 485 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 ADAM28Q9UKQ2 775 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 GMPPBQ9Y5P6 360 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 USP16Q9Y5T5 823 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 FRMPD4Q14CM0 1322 aa3.44□□□□□ -1.86
HMGN3P1-201ENST00000453847 BOLA2-SMG1P6H3BVE0 249 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 NR5A2O00482 541 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 TIMM8AO60220 97 aaPredicted RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 CTAG2O75638 210 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 SORBS2O94875 1100 aaKnown RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 IGHV3-9P01782 118 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 SLC2A3P11169 496 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 NCF2P19878 526 aaPredicted RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 NDUFV3P56181 108 aaKnown RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 ATP5IP56385 69 aaPredicted RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 RPL36AP83881 106 aaKnown RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 FKBP3Q00688 224 aaKnown RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 PLOD1Q02809 727 aaPredicted RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 NCBP1Q09161 790 aaKnown RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 SRSF5Q13243 272 aaKnown RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 PLD1Q13393 1074 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 SFT2D3Q587I9 215 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 PDZK1Q5T2W1 519 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 C1orf185Q5T7R7 199 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 UQCC3Q6UW78 93 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 APOOLQ6UXV4 268 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 ZFAND4Q86XD8 727 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 SAMD12Q8N8I0 201 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 CATSPER1Q8NEC5 780 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 OR9K2Q8NGE7 335 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 OR5L2Q8NGL0 311 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 FAM76AQ8TAV0 307 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 AGR3Q8TD06 166 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 TBCKQ8TEA7 893 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 RASD2Q96D21 266 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 C7orf34Q96L11 122 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 HSD17B14Q9BPX1 270 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 GLIPR2Q9H4G4 154 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 RNF41Q9H4P4 317 aaPredicted RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 SGK2Q9HBY8 427 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 CRLF2Q9HC73 371 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 IL36GQ9NZH8 169 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 RCOR3Q9P2K3 495 aaPredicted RBP3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 PISDQ9UG56 409 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 SPATA2Q9UM82 520 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 RPH3ALQ9UNE2 315 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 TIMM10BQ9Y5J6 103 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 TTC41PQ6P2S7 1318 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 PHLPP2Q6ZVD8 1323 aa3.43□□□□□ -1.86
HMGN3P1-201ENST00000453847 FRMPD3Q5JV73 1810 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 IGKV2D-30A0A075B6S6 120 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 IGHV4-30-2A0A087WSY4 118 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 TRGV8A0A0C4DH27 118 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 TEX48A0A1B0GUV7 120 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 A0A1B0GVL5 298 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 SERTM2A0A1B0GWG4 89 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 A0A1W2PNV4 684 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 TRAFD1O14545 582 aaPredicted RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 RAMP1O60894 148 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 UPK3AO75631 287 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 IGFBP1P08833 259 aaPredicted RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 HBQ1P09105 142 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 PABPC4LP0CB38 370 aaKnown RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 CFC1BP0CG36 223 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 CFC1P0CG37 223 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 POU2F1P14859 743 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 MX1P20591 662 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 GALP22466 123 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 HLCSP50747 726 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 SUCLG1P53597 346 aaKnown RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 LIM2P55344 173 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 GSCP56915 257 aaPredicted RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 RPL8P62917 257 aaKnown RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 IL9RQ01113 521 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 COX10Q12887 443 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 CALCOCO2Q13137 446 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 LY6DQ14210 128 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 GANABQ14697 944 aaKnown RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 SIX1Q15475 284 aaPredicted RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 ZIC1Q15915 447 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 MTHFSDQ2M296 383 aaKnown RBP3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 MOGAT2Q3SYC2 334 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 TP53I3Q53FA7 332 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 ACER2Q5QJU3 275 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 MUC21Q5SSG8 566 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 PRAMEF5Q5TYX0 476 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 PRAMEF20Q5VT98 475 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 PRAMEF6Q5VXH4 476 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 LIPNQ5VXI9 398 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 SERINC5Q86VE9 423 aa3.42□□□□□ -1.86
HMGN3P1-201ENST00000453847 NBPF5PQ86XG9 351 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms