RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 FBXO30Q8TB52 745 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 FAM110BQ8TC76 370 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 GPR151Q8TDV0 419 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 DUSP19Q8WTR2 217 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 INTS12Q96CB8 462 aaKnown RBP11.27□□□□□ -0.61
CPSF4-208ENST00000452047 PPP3R2Q96LZ3 170 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 RASSF1Q9NS23 344 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 DNAJB12Q9NXW2 375 aaKnown RBP11.27□□□□□ -0.61
CPSF4-208ENST00000452047 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.61
CPSF4-208ENST00000452047 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.61
CPSF4-208ENST00000452047 NF1P21359 2839 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 TMEM114B3SHH9 223 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 ALG1L2C9J202 215 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 H0YC42 278 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 EMC8O43402 210 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 PEX11AO75192 247 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 KCNK2O95069 426 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 SLU7O95391 586 aaKnown RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 OXSR1O95747 527 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 ANGPTL1O95841 491 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 NGFRP08138 427 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 PEPDP12955 493 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 HK1P19367 917 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 HPCAL1P37235 193 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 CLK3P49761 638 aaKnown RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 TPD52P55327 224 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 C17orf67Q0P5P2 114 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 DAZAP2Q15038 168 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 TMEM44Q2T9K0 475 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 ATP6AP1LQ52LC2 224 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 C6orf136Q5SQH8 315 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 ZCCHC12Q6PEW1 402 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 SZRD1Q7Z422 152 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 GALNT10Q86SR1 603 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 KIF18BQ86Y91 864 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 UBQLNLQ8IYU4 475 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 OR7A2PQ8NGA2 310 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 OR4C3Q8NH37 302 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 GOT1L1Q8NHS2 421 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 PSMA8Q8TAA3 256 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 SLC9A6Q92581 669 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 FAM120BQ96EK7 910 aaKnown RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 C16orf58Q96GQ5 468 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 POLDIP3Q9BY77 421 aaKnown RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 CLEC4MQ9H2X3 399 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 ACBD3Q9H3P7 528 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 PTGES2Q9H7Z7 377 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 GALNT8Q9NY28 637 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 ZNF337Q9Y3M9 751 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 ABCA4P78363 2273 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 ZFHX3Q15911 3703 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 NUP214P35658 2090 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-208ENST00000452047 MTORP42345 2549 aa11.26□□□□□ -0.61
CPSF4-208ENST00000452047 A0A1W2PNV4 684 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 TUBAL3A6NHL2 446 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 SLC22A20A6NK97 555 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 LINC01387J3KSC0 135 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 SKAP2O75563 359 aaPredicted RBP11.25□□□□□ -0.61
CPSF4-208ENST00000452047 LAMP1P11279 417 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 EPXP11678 715 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 TBXA2RP21731 343 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 MAPK1P28482 360 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 RPL3P39023 403 aaKnown RBP11.25□□□□□ -0.61
CPSF4-208ENST00000452047 SERPINB4P48594 390 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 SUCLG1P53597 346 aaKnown RBP11.25□□□□□ -0.61
CPSF4-208ENST00000452047 CLDN20P56880 219 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 ZNF844Q08AG5 666 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 GLYR1Q49A26 553 aaPredicted RBP11.25□□□□□ -0.61
CPSF4-208ENST00000452047 FIGNL1Q6PIW4 674 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 LUZP2Q86TE4 346 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 RIMKLAQ8IXN7 391 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 OR5M1Q8NGP8 315 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 NUDT8Q8WV74 236 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 OTUB1Q96FW1 271 aaPredicted RBP11.25□□□□□ -0.61
CPSF4-208ENST00000452047 PKNOX2Q96KN3 472 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 PIGQQ9BRB3 760 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 C1orf50Q9BV19 199 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 RBM24Q9BX46 236 aaKnown RBP11.25□□□□□ -0.61
CPSF4-208ENST00000452047 PIGMQ9H3S5 423 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 LIME1Q9H400 295 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 ZCCHC3Q9NUD5 404 aaKnown RBP11.25□□□□□ -0.61
CPSF4-208ENST00000452047 FBXO34Q9NWN3 711 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 PACSIN3Q9UKS6 424 aa11.25□□□□□ -0.61
CPSF4-208ENST00000452047 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
CPSF4-208ENST00000452047 A0A1W2PRB8 838 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 A8MXE2 369 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 SHISA8B8ZZ34 492 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 H3BML4 177 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 TNFRSF21O75509 655 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 LYPLA1O75608 230 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-208ENST00000452047 HMGN2P05204 90 aaKnown RBP11.24□□□□□ -0.61
CPSF4-208ENST00000452047 CRHP06850 196 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 ALOX5P09917 674 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 DDX5P17844 614 aaKnown RBP11.24□□□□□ -0.61
CPSF4-208ENST00000452047 LCN1P31025 176 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 ART1P52961 327 aa11.24□□□□□ -0.61
CPSF4-208ENST00000452047 IST1P53990 364 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms