RNA–Protein interactions for RNA: ENST00000449279.5

SEM1-206, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-206ENST00000449279 IGFL3Q6UXB1 125 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 BNC2Q6ZN30 1099 aaPredicted RBP9.04□□□□□ -0.96
SEM1-206ENST00000449279 MARCH3Q86UD3 253 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 VRK2Q86Y07 508 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 Q8NA96 180 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 PSD4Q8NDX1 1056 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 HAS2Q92819 552 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 NTNG2Q96CW9 530 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 BBC3Q96PG8 261 aaPredicted RBP9.04□□□□□ -0.96
SEM1-206ENST00000449279 CDRT15Q96T59 188 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 HOPXQ9BPY8 73 aaPredicted RBP9.04□□□□□ -0.96
SEM1-206ENST00000449279 TREX2Q9BQ50 279 aaPredicted RBP9.04□□□□□ -0.96
SEM1-206ENST00000449279 ECSITQ9BQ95 431 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 SAP130Q9H0E3 1048 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.04□□□□□ -0.96
SEM1-206ENST00000449279 RAD21L1Q9H4I0 556 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 TMEM38AQ9H6F2 299 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 EXD2Q9NVH0 621 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 ABI3Q9P2A4 366 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 P2RX2Q9UBL9 471 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 RALYQ9UKM9 306 aaKnown RBP9.04□□□□□ -0.96
SEM1-206ENST00000449279 LHX6Q9UPM6 363 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 L3MBTL1Q9Y468 752 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 WDR45Q9Y484 360 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 CHST2Q9Y4C5 530 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 ZNF451Q9Y4E5 1061 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.04□□□□□ -0.96
SEM1-206ENST00000449279 COL6A6A6NMZ7 2263 aa9.04□□□□□ -0.96
SEM1-206ENST00000449279 PRRC2CQ9Y520 2896 aaKnown RBP9.04□□□□□ -0.96
SEM1-206ENST00000449279 C15orf38-AP3S2A0A0A6YYH1 394 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 PRAMEF25A6NGN4 478 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 DUXAA6NLW8 204 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 GMFGO60234 142 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 NME2P1O60361 137 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 DNAJA2O60884 412 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 STX11O75558 287 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 SLC25A12O75746 678 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 PGM3O95394 542 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 EPPINO95925 133 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 SP1P08047 785 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 NAGAP17050 411 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 NME2P22392 152 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 EVI2BP34910 448 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 CASRP41180 1078 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 CASP3P42574 277 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 PCBP3P57721 371 aaKnown RBP9.03□□□□□ -0.96
SEM1-206ENST00000449279 EEFSECP57772 596 aaKnown RBP9.03□□□□□ -0.96
SEM1-206ENST00000449279 VMACQ2NL98 169 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 PLEKHN1Q494U1 663 aaPredicted RBP9.03□□□□□ -0.96
SEM1-206ENST00000449279 FLYWCH1Q4VC44 716 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 ZNF766Q5HY98 468 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 RNFT1Q5M7Z0 435 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 FNDC7Q5VTL7 733 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 SLC6A19Q695T7 634 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 OR5M10Q6IEU7 315 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 C16orf89Q6UX73 402 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 ZNF836Q6ZNA1 936 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 LRRC74BQ6ZQY2 392 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 Q6ZS92 163 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 NUP54Q7Z3B4 507 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 GALNTL5Q7Z4T8 443 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 ARPINQ7Z6K5 226 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 SERPINA11Q86U17 422 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 PTRH1Q86Y79 214 aaKnown RBP9.03□□□□□ -0.96
SEM1-206ENST00000449279 MICU2Q8IYU8 434 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 ZNF619Q8N2I2 560 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 FBXW8Q8N3Y1 598 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 ZNF614Q8N883 585 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 OR2T12Q8NG77 320 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 OR10Q1Q8NGQ4 319 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 PAQR8Q8TEZ7 354 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 ZNF524Q96C55 264 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 SCMH1Q96GD3 660 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 REXO5Q96IC2 774 aaKnown RBP9.03□□□□□ -0.96
SEM1-206ENST00000449279 TRNT1Q96Q11 434 aaKnown RBP9.03□□□□□ -0.96
SEM1-206ENST00000449279 PCDHAC1Q9H158 963 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 ALG2Q9H553 416 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 SPAG4Q9NPE6 437 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 TUBA8Q9NY65 449 aaPredicted RBP9.03□□□□□ -0.96
SEM1-206ENST00000449279 CD300AQ9UGN4 299 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 CORO2BQ9UQ03 480 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 PCDHGA10Q9Y5H3 936 aa9.03□□□□□ -0.96
SEM1-206ENST00000449279 ELOVL7A1L3X0 281 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 LRRC3CA6NJW4 275 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 TMEM229AB2RXF0 380 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 C5orf58C9J3I9 102 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 ERVH48-1M5A8F1 160 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 GNB5O14775 395 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 FRS3O43559 492 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 TPST1O60507 370 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 WISP1O95388 367 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 AGR2O95994 175 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 RFPL3SP0C7P2 107 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 ATP6V1C1P21283 382 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 TBXA2RP21731 343 aa9.02□□□□□ -0.97
SEM1-206ENST00000449279 RPS4Y1P22090 263 aaKnown RBP9.02□□□□□ -0.97
SEM1-206ENST00000449279 TMED10P49755 219 aaKnown RBP9.02□□□□□ -0.97
SEM1-206ENST00000449279 ANXA11P50995 505 aaKnown RBP9.02□□□□□ -0.97
SEM1-206ENST00000449279 EFR3AQ14156 821 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms