RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 RASSF5Q8WWW0 418 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 HGDQ93099 445 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 POP5Q969H6 163 aaKnown RBP12.92□□□□□ -0.34
SHMT2-203ENST00000449049 RSPO3Q9BXY4 272 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-203ENST00000449049 ADPRHL2Q9NX46 363 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 SEC14L3Q9UDX4 400 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 TEKT2Q9UIF3 430 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 SAMD4AQ9UPU9 718 aaKnown RBP12.92□□□□□ -0.34
SHMT2-203ENST00000449049 IFT52Q9Y366 437 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 KCNMB2Q9Y691 235 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 UTS2O95399 124 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 DBIP07108 87 aaKnown RBP12.92□□□□□ -0.34
SHMT2-203ENST00000449049 C8BP07358 591 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 THBS1P07996 1170 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 NGFRP08138 427 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 CD247P20963 164 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 FBXW4P57775 412 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 SELENOWP63302 87 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 GRAMD1BQ3KR37 738 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 DESI1Q6ICB0 168 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 NUP54Q7Z3B4 507 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 GOLM1Q8NBJ4 401 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 OR52P1PQ8NH57 321 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 SLC26A7Q8TE54 656 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 ASB15Q8WXK1 588 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 ZBTB20Q9HC78 741 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-203ENST00000449049 UBQLN4Q9NRR5 601 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 FLRT3Q9NZU0 649 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 A0A087WV48 116 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 K7ENP7 123 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 TAF4O00268 1085 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 HS6ST1O60243 411 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 ICOSLGO75144 302 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 OR6B1O95007 311 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 OXSR1O95747 527 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-203ENST00000449049 TBXA2RP21731 343 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 PRKAR1BP31321 381 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 KCNJ5P48544 419 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 UCNP55089 124 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 RHDQ02161 417 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF311Q5JNZ3 666 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-203ENST00000449049 DHRS4L2Q6PKH6 230 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 HMGN2P46Q86SG4 172 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 SPATA24Q86W54 205 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 VRK2Q86Y07 508 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 BEST3Q8N1M1 668 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 SMYD1Q8NB12 490 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 RNF138Q8WVD3 245 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 TTC9Q92623 222 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 PINK1Q9BXM7 581 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 TRIM45Q9H8W5 580 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF443Q9Y2A4 671 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-203ENST00000449049 CDK2AP1O14519 115 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 SUV39H1O43463 412 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 CEACAM4O75871 244 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF682O95780 498 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 NID1P14543 1247 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 PAX7P23759 505 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 DUSP7Q16829 419 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 LIN52Q52LA3 116 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 KLHL26Q53HC5 615 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 PDZK1Q5T2W1 519 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 ABHD17BQ5VST6 288 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 GPALPP1Q8IXQ4 340 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 TMEM156Q8N614 296 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 FAM86B1Q8N7N1 296 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF527Q8NB42 609 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 GPR32P1Q8NGA4 272 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 ZCCHC14Q8WYQ9 949 aaKnown RBP12.91□□□□□ -0.34
SHMT2-203ENST00000449049 TMCO6Q96DC7 493 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 DOHHQ9BU89 302 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 CACYBPQ9HB71 228 aaKnown RBP12.91□□□□□ -0.34
SHMT2-203ENST00000449049 GPR83Q9NYM4 423 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 CHST2Q9Y4C5 530 aa12.91□□□□□ -0.34
SHMT2-203ENST00000449049 TMEM8BA6NDV4 472 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 FADS1O60427 444 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 TPST1O60507 370 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 PRKD3O94806 890 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 UMPSP11172 480 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 IL7RP16871 459 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 TMPRSS3P57727 454 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 EEF1A1P68104 462 aaKnown RBP12.9□□□□□ -0.34
SHMT2-203ENST00000449049 FGFBP1Q14512 234 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 LARS2Q15031 903 aaKnown RBP12.9□□□□□ -0.34
SHMT2-203ENST00000449049 RNF220Q5VTB9 566 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 AGAP7PQ5VUJ5 663 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 ENPP6Q6UWR7 440 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF836Q6ZNA1 936 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 LZICQ8WZA0 190 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 DUS3LQ96G46 650 aaKnown RBP12.9□□□□□ -0.34
SHMT2-203ENST00000449049 RSRC1Q96IZ7 334 aaKnown RBP12.9□□□□□ -0.34
SHMT2-203ENST00000449049 AGAP4Q96P64 663 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 NODALQ96S42 347 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF552Q9H707 407 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-203ENST00000449049 SH2D2AQ9NP31 389 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 BATF3Q9NR55 127 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 ABI3Q9P2A4 366 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms