RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 LY6DQ14210 128 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 KPNB1Q14974 876 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 TOMM20Q15388 145 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR1C1Q15619 314 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 LINC00303Q3SY05 128 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 EXOSC6Q5RKV6 272 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 C1orf146Q5VVC0 180 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 HEPHL1Q6MZM0 1159 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 REEP3Q6NUK4 255 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 ISLR2Q6UXK2 745 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF836Q6ZNA1 936 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 ARPINQ7Z6K5 226 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 SERPINA11Q86U17 422 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 SPATA24Q86W54 205 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF227Q86WZ6 799 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 LACC1Q8IV20 430 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF619Q8N2I2 560 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 CLIP4Q8N3C7 705 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR52P1PQ8NH57 321 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 DNAJB8Q8NHS0 232 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 NUBPLQ8TB37 319 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 PHOSPHO1Q8TCT1 267 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 MIPOL1Q8TD10 442 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 SLC26A7Q8TE54 656 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 GRHL3Q8TE85 626 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 CNOT9Q92600 299 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 HGDQ93099 445 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 SPACA9Q96E40 222 aaPredicted RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 ABHD17AQ96GS6 310 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 REXO5Q96IC2 774 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 VPS50Q96JG6 964 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF354BQ96LW1 612 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 IP6K3Q96PC2 410 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 STACQ99469 402 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 SH3GL1Q99961 368 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 UTP23Q9BRU9 249 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 DUSP22Q9NRW4 184 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 DEPPQ9NTK1 212 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 LRFN1Q9P244 771 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 RALYQ9UKM9 306 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 PPIEQ9UNP9 301 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 CORO2BQ9UQ03 480 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF443Q9Y2A4 671 aaPredicted RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 CARD8Q9Y2G2 431 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 YARS2Q9Y2Z4 477 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 PCDHGA10Q9Y5H3 936 aa6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 TNRC6AQ8NDV7 1962 aaKnown RBP6.93□□□□□ -1.3
SF3A3P1-201ENST00000446317 A0A087WV48 116 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 A0A1W2PQ72 361 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PRAMEF25A6NGN4 478 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 DUXAA6NLW8 204 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 B4DXG7 233 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 HS6ST1O60243 411 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 KIAA0513O60268 411 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 STX11O75558 287 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CIB2O75838 187 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 WISP2O76076 250 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PRKD3O94806 890 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 OPN1LWP04000 364 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 FBXO45P0C2W1 286 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 HPGDP15428 266 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 GGT1P19440 569 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CCNA2P20248 432 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 FUT4P22083 530 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 EVI2BP34910 448 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 RASSF2P50749 326 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ANXA11P50995 505 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CRISP3P54108 245 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PLAURQ03405 335 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 FADDQ13158 208 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CCNIQ14094 377 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF630Q2M218 657 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF791Q3KP31 576 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 NADK2Q4G0N4 442 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CYBRD1Q53TN4 286 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CRB2Q5IJ48 1285 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF311Q5JNZ3 666 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 H3F3CQ6NXT2 135 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 NET1Q7Z628 596 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ARMC8Q8IUR7 673 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CHDHQ8NE62 594 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 GPR32P1Q8NGA4 272 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR4D11Q8NGI4 311 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 DUSP19Q8WTR2 217 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TP53INP1Q96A56 240 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF524Q96C55 264 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TRNT1Q96Q11 434 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 NPAS1Q99742 590 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TBL1XR1Q9BZK7 514 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF350Q9GZX5 532 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 C1orf21Q9H246 121 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 NDE1Q9NXR1 346 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 MED11Q9P086 117 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 RHCGQ9UBD6 479 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 SEC14L3Q9UDX4 400 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PRPF19Q9UMS4 504 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 POMPQ9Y244 141 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 SNX13Q9Y5W8 968 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 IGF2RP11717 2491 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 NBEAQ8NFP9 2946 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms