RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 NTN1O95631 604 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 HMGA1P17096 107 aaKnown RBP9.39□□□□□ -0.91
CASP4-203ENST00000444739 ATP5A1P25705 553 aaKnown RBP9.39□□□□□ -0.91
CASP4-203ENST00000444739 CALCRP30988 508 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 KIAA1024LP59773 190 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 PITPNAQ00169 270 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 HSPB3Q12988 150 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 GPR68Q15743 365 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 RTP2Q5QGT7 225 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 SFRP5Q5T4F7 317 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 ATRAIDQ6UW56 229 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 HMGN2P46Q86SG4 172 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 LMNTD1Q8N9Z9 388 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 C2orf15Q8WU43 125 aaKnown RBP9.39□□□□□ -0.91
CASP4-203ENST00000444739 ST8SIA2Q92186 375 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 SCAMP4Q969E2 229 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 TMEM159Q96B96 161 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 FAM46AQ96IP4 442 aaKnown RBP9.39□□□□□ -0.91
CASP4-203ENST00000444739 ART5Q96L15 291 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 FAM83CQ9BQN1 747 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 LRRN3Q9H3W5 708 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 NEUROD4Q9HD90 331 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 NKIRAS2Q9NYR9 191 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 B4GALT6Q9UBX8 382 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 CLEC4AQ9UMR7 237 aa9.39□□□□□ -0.91
CASP4-203ENST00000444739 MCRIP1C9JLW8 97 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 DNASE2O00115 360 aaPredicted RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 AIPO00170 330 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 PDCD5O14737 125 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 PRAF2O60831 178 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 SLC2A10O95528 541 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 LDOC1O95751 146 aaPredicted RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 EOMESO95936 686 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 RPLP2P05387 115 aaKnown RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 ATP6V1E1P36543 226 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 OMPP47874 163 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 SIM1P81133 766 aaPredicted RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 GRM7Q14831 915 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 PGGHGQ32M88 737 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 B3GNTL1Q67FW5 361 aaPredicted RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 CDC73Q6P1J9 531 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 GET4Q7L5D6 327 aaPredicted RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 DGLUCYQ7Z3D6 616 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 HSD17B13Q7Z5P4 300 aaPredicted RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 SLC9B2Q86UD5 537 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 SPICQ8N5J4 248 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 FAM98AQ8NCA5 519 aaKnown RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 ZNF740Q8NDX6 193 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 FAM71CQ8NEG0 241 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 OR4D9Q8NGE8 314 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 OR5D16Q8NGK9 328 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 COQ8AQ8NI60 647 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 SCARB1Q8WTV0 552 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 FCRL4Q96PJ5 515 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 NPAS1Q99742 590 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 ALG8Q9BVK2 526 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 TMPRSS13Q9BYE2 586 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 OR51I1Q9H343 314 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 WDR26Q9H7D7 661 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 KCNK12Q9HB15 430 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 HMX1Q9NP08 348 aaPredicted RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 NANSQ9NR45 359 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 CA10Q9NS85 328 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 MED17Q9NVC6 651 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 CFAP97Q9P2B7 532 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 ZMAT5Q9UDW3 170 aaKnown RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 RGS17Q9UGC6 210 aaPredicted RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 GMEB2Q9UKD1 530 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 CA5BQ9Y2D0 317 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 MRPS7Q9Y2R9 242 aaKnown RBP9.38□□□□□ -0.91
CASP4-203ENST00000444739 DYRK1BQ9Y463 629 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 BACE2Q9Y5Z0 518 aa9.38□□□□□ -0.91
CASP4-203ENST00000444739 A0A1B0GUH1 482 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 SLC5A10A0PJK1 596 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 GMDSO60547 372 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 SELENOFO60613 162 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 GALR3O60755 368 aaPredicted RBP9.37□□□□□ -0.91
CASP4-203ENST00000444739 TBX19O60806 448 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 PTP4A3O75365 173 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 GIPP09681 153 aaPredicted RBP9.37□□□□□ -0.91
CASP4-203ENST00000444739 NR2F1P10589 423 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 NAT2P11245 290 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 NFYAP23511 347 aaPredicted RBP9.37□□□□□ -0.91
CASP4-203ENST00000444739 PDHA2P29803 388 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 IFNGR2P38484 337 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 FRKP42685 505 aaPredicted RBP9.37□□□□□ -0.91
CASP4-203ENST00000444739 VEGFCP49767 419 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 PCBP4P57723 403 aaKnown RBP9.37□□□□□ -0.91
CASP4-203ENST00000444739 ERVK-21P61565 698 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 TSTA3Q13630 321 aaPredicted RBP9.37□□□□□ -0.91
CASP4-203ENST00000444739 CAMK1Q14012 370 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 HLXQ14774 488 aaPredicted RBP9.37□□□□□ -0.91
CASP4-203ENST00000444739 METTL11BQ5VVY1 283 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 HIST2H2AA3Q6FI13 130 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 MTFR2Q6P444 385 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 ARL9Q6T311 187 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 CEACAM19Q7Z692 300 aa9.37□□□□□ -0.91
CASP4-203ENST00000444739 PXKQ7Z7A4 578 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms