RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 OSTF1Q92882 214 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 CCDC127Q96BQ5 260 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SLC41A3Q96GZ6 507 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SERAC1Q96JX3 654 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 INPP4AQ96PE3 977 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZNF385AQ96PM9 386 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 NEDD4LQ96PU5 975 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 AGPAT1Q99943 283 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 DERL2Q9GZP9 239 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 OR51V1Q9H2C8 321 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 ASB8Q9H765 288 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 ANKRA2Q9H9E1 313 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 FN3KRPQ9HA64 309 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZFP14Q9HCL3 533 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SLC52A3Q9NQ40 469 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 BATF3Q9NR55 127 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 RNF186Q9NXI6 227 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 IL36AQ9UHA7 158 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 TMCO1Q9UM00 188 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 RPH3ALQ9UNE2 315 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 ERGIC3Q9Y282 383 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 OR1A2Q9Y585 309 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 CACNA1IQ9P0X4 2223 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ELP1O95163 1332 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZMYM6O95789 1325 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MN1Q10571 1320 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 FGD5Q6ZNL6 1462 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 SERINC4A6NH21 518 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 PDXKO00764 312 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZNF208O43345 1280 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 B4GAT1O43505 415 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 TOM1O60784 492 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 SCN2BO60939 215 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CDH16O75309 829 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 SUPT3HO75486 399 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 TXNDC12O95881 172 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MBD3O95983 291 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CALCAP01258 141 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MBP02144 154 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 FABP1P07148 127 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 HOXC6P09630 235 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CT45A8P0DMV1 189 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CT45A9P0DMV2 189 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CCL2P13500 99 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CYP11B1P15538 503 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 NQO2P16083 231 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 EIF2S2P20042 333 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MSH3P20585 1137 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 EFNA1P20827 205 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ITGA3P26006 1051 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZNF33AQ06730 810 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 SCRN3Q0VDG4 424 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 STX5Q13190 355 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ITGA9Q13797 1035 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 EZH2Q15910 746 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZNF528Q3MIS6 628 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CT45A2Q5DJT8 189 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 PLCZ1Q86YW0 608 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CEP112Q8N8E3 955 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MAB21L3Q8N8X9 362 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZNF383Q8NA42 475 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ADAD2Q8NCV1 583 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 OR4A15Q8NGL6 344 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 OR6M1Q8NGM8 313 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 HCAR2Q8TDS4 363 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 SLC35C1Q96A29 364 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MRGPRFQ96AM1 343 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CIDECQ96AQ7 238 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 IGSF21Q96ID5 467 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 S1PR3Q99500 378 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 TMEM246Q9BRR3 403 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CCDC28BQ9BUN5 200 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MRPL13Q9BYD1 178 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 RGCCQ9H4X1 137 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 PNO1Q9NRX1 252 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MAN2C1Q9NTJ4 1040 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MS4A12Q9NXJ0 267 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 PLEK2Q9NYT0 353 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 KLHL8Q9P2G9 620 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 CIDEBQ9UHD4 219 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 MRPS7Q9Y2R9 242 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 PLLPQ9Y342 182 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 TTC37Q6PGP7 1564 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 ADAMTS12P58397 1594 aa3.64□□□□□ -1.83
CDC42BPA-207ENST00000441725 A0A0U1RQS6 177 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 RNF13O43567 381 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 JAK2O60674 1132 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 PRSS2P07478 247 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 MAGP20916 626 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 OXTRP30559 389 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 NUMBP49757 651 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 ACTBP60709 375 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 ACTA2P62736 377 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 ACTG1P63261 375 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 ACTG2P63267 376 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 ACTC1P68032 377 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 ACTA1P68133 377 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 IRF8Q02556 426 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 TRAF2Q12933 501 aa3.63□□□□□ -1.83
CDC42BPA-207ENST00000441725 DYNC1I2Q13409 638 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms